Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://www.cancerrxgene.org/
Full name: Genomics of Drug Sensitivity in Cancer
Description: GDSC is an academic research program to identify molecular features of cancers that predict response to anti-cancer drugs.
Year founded: 2013
Last update: 2014-6
Version: v5.0
Accessibility:
Manual:
Accessible
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Country/Region: United Kingdom

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Wellcome Sanger Institute
Address: Hinxton CB10 1SA,UK
City: Cambridge
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): Mathew J. Garnett
Contact email (PI/Helpdesk): mg12@sanger.ac.uk

Publications

23180760
Genomics of Drug Sensitivity in Cancer (GDSC): a resource for therapeutic biomarker discovery in cancer cells. [PMID: 23180760]
Yang W, Soares J, Greninger P, Edelman EJ, Lightfoot H, Forbes S, Bindal N, Beare D, Smith JA, Thompson IR, Ramaswamy S, Futreal PA, Haber DA, Stratton MR, Benes C, McDermott U, Garnett MJ.

Alterations in cancer genomes strongly influence clinical responses to treatment and in many instances are potent biomarkers for response to drugs. The Genomics of Drug Sensitivity in Cancer (GDSC) database (www.cancerRxgene.org) is the largest public resource for information on drug sensitivity in cancer cells and molecular markers of drug response. Data are freely available without restriction. GDSC currently contains drug sensitivity data for almost 75 000 experiments, describing response to 138 anticancer drugs across almost 700 cancer cell lines. To identify molecular markers of drug response, cell line drug sensitivity data are integrated with large genomic datasets obtained from the Catalogue of Somatic Mutations in Cancer database, including information on somatic mutations in cancer genes, gene amplification and deletion, tissue type and transcriptional data. Analysis of GDSC data is through a web portal focused on identifying molecular biomarkers of drug sensitivity based on queries of specific anticancer drugs or cancer genes. Graphical representations of the data are used throughout with links to related resources and all datasets are fully downloadable. GDSC provides a unique resource incorporating large drug sensitivity and genomic datasets to facilitate the discovery of new therapeutic biomarkers for cancer therapies.

Nucleic Acids Res. 2013:41(Database issue) | 1689 Citations (from Europe PMC, 2024-05-04)

Ranking

All databases:
81/6000 (98.667%)
Health and medicine:
20/1394 (98.637%)
81
Total Rank
1,631
Citations
148.273
z-index

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Record metadata

Created on: 2015-06-20
Curated by:
Nashaiman Pervaiz [2018-12-28]
Lin Liu [2016-03-29]
Lin Liu [2016-03-25]
Jian Sang [2015-12-11]
Jian Sang [2015-06-28]