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Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://www.umd.be/THAP1
Full name: UMD Locus-Specific Database
Description: UMD-THAP1 LSDB lists 56 probands and 43 relatives with the associated clinical phenotype when available util 2011. It contains the identification of a larger number of THAP1 mutations and collection of high-quality clinical information for each described mutation through international collaborative effort
Year founded: 2011
Last update:
Version:
Accessibility:
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Country/Region: France

Contact information

University/Institution: INSERM U827
Address: INSERM U827, Montpellier, F-34000, France
City: Montpellier
Province/State:
Country/Region: France
Contact name (PI/Team): Gwenaëlle Collod-Béroud
Contact email (PI/Helpdesk): gwenaelle.collod-beroud@inserm.fr

Publications

21793105
DYT6 dystonia: review of the literature and creation of the UMD Locus-Specific Database (LSDB) for mutations in the THAP1 gene. [PMID: 21793105]
Blanchard A, Ea V, Roubertie A, Martin M, Coquart C, Claustres M, Béroud C, Collod-Béroud G.

By family-based screening, first Fuchs and then many other authors showed that mutations in THAP1 (THAP [thanatos-associated protein] domain-containing, apoptosis-associated protein 1) account for a substantial proportion of familial, early-onset, nonfocal, primary dystonia cases (DYT6 dystonia). THAP1 is the first transcriptional factor involved in primary dystonia and the hypothesis of a transcriptional deregulation, which was primarily proposed for the X-linked dystonia-parkinsonism (DYT3 dystonia), provided thus a new way to investigate the possible mechanism underlying the development of dystonic movements. Currently, 56 families present with a THAP1 mutation; however, no genotype/phenotype relationship has been found. Therefore, we carried out a systematic review of the literature on the THAP1 gene to colligate all reported patients with a specific THAP1 mutation and the associated clinical signs in order to describe the broad phenotypic continuum of this disorder. To facilitate the comparison of the identified mutations, we created a Locus-Specific Database (UMD-THAP1 LSDB) available at http://www.umd.be/THAP1/. Currently, the database lists 56 probands and 43 relatives with the associated clinical phenotype when available. The identification of a larger number of THAP1 mutations and collection of high-quality clinical information for each described mutation through international collaborative effort will help investigating the structure-function and genotype-phenotype correlations in DYT6 dystonia.

Hum Mutat. 2011:32(11) | 38 Citations (from Europe PMC, 2024-04-06)

Ranking

All databases:
2541/6000 (57.667%)
Raw bio-data:
204/539 (62.338%)
Genotype phenotype and variation:
368/852 (56.925%)
Health and medicine:
576/1394 (58.752%)
2541
Total Rank
38
Citations
2.923
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Record metadata

Created on: 2018-01-27
Curated by:
Meiye Jiang [2018-02-26]