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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-TM-A7C3-01A PRAMEF18 LGG chr1 13225205 13225205 C A p.Q174H missense_variant PASS 0.116040956
    TCGA-TM-A7C3-01A MKNK1 LGG chr1 46558727 46558727 C T p.E416K missense_variant PASS 0.153846154
    TCGA-TM-A7C3-01A FGFR1 LGG chr1 152308926 152308926 C T p.R1987H missense_variant PASS 0.421686747
    TCGA-TM-A7C3-01A EFNA3 LGG chr1 155086158 155086158 C T p.T180I missense_variant PASS 0.269230769
    TCGA-TM-A7C3-01A ARHGEF2 LGG chr1 155965742 155965742 G A p.P120L missense_variant PASS 0.295454545
    TCGA-TM-A7C3-01A SOAT1 LGG chr1 179350306 179350306 A G p.K442R missense_variant PASS 0.411764706
    TCGA-TM-A7C3-01A USH2A LGG chr1 215634664 215634664 C T p.R5031Q missense_variant PASS 0.344086022
    TCGA-TM-A7C3-01A OR2T4 LGG chr1 248362393 248362393 C A p.A271A synonymous_variant PASS 0.433333333
    TCGA-TM-A7C3-01A CPSF3 LGG chr2 9433898 9433898 C A p.Q183K missense_variant PASS 0.385714286
    TCGA-TM-A7C3-01A SCN3A LGG chr2 165140656 165140656 G A p.P672S missense_variant PASS 0.457627119