BrainBase a curated knowledgebase for brain diseases

  • Home
  • Variation
    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-S9-A7IX-01A MAST2 LGG chr1 45829503 45829503 G A p.S130S synonymous_variant PASS 0.31147541
    TCGA-S9-A7IX-01A TGFBR3 LGG chr1 91716337 91716337 C T p.G589R missense_variant PASS 0.254237288
    TCGA-S9-A7IX-01A H3C13 LGG chr1 149813316 149813316 G C p.P122P synonymous_variant PASS 0.275362319
    TCGA-S9-A7IX-01A TBX19 LGG chr1 168312933 168312933 G A p.S426S synonymous_variant PASS 0.230769231
    TCGA-S9-A7IX-01A PTPRC LGG chr1 198741935 198741935 G C p.V824L missense_variant PASS 0.285714286
    TCGA-S9-A7IX-01A NPHP1 LGG chr2 110146807 110146807 C T p.C488Y missense_variant PASS 0.275362319
    TCGA-S9-A7IX-01A TTN LGG chr2 178530014 178530014 T A p.T33852S missense_variant PASS 0.23880597
    TCGA-S9-A7IX-01A STK11IP LGG chr2 219608583 219608583 C T p.A546V missense_variant;splice_region PASS 0.311111111
    TCGA-S9-A7IX-01A ACTRT3 LGG chr3 169768307 169768307 C T p.E82K missense_variant PASS 0.25
    TCGA-S9-A7IX-01A UGT2B4 LGG chr4 69480816 69480816 G A p.R469C missense_variant PASS 0.251396648