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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-RR-A6KC-01A EPHA8 GBM chr1 22600729 22600729 C T p.S819S synonymous_variant PASS 0.377358491
    TCGA-RR-A6KC-01A ARHGAP29 GBM chr1 94177640 94177640 C T p.A959A synonymous_variant PASS 0.25
    TCGA-RR-A6KC-01A WDR47 GBM chr1 108971540 108971540 C T p.V884M missense_variant PASS 0.382352941
    TCGA-RR-A6KC-01A KLHDC8A GBM chr1 205337516 205337516 C T p.M312I missense_variant PASS 0.322580645
    TCGA-RR-A6KC-01A RAB3GAP2 GBM chr1 220193353 220193353 T C p.H386R missense_variant PASS 0.235294118
    TCGA-RR-A6KC-01A OR2W3 GBM chr1 247896272 247896272 G A p.R229Q missense_variant PASS 0.365217391
    TCGA-RR-A6KC-01A IL1R1 GBM chr2 102165229 102165229 C T p.D137D synonymous_variant PASS 0.47826087
    TCGA-RR-A6KC-01A UBXN4 GBM chr2 135753580 135753580 T G intron_variant PASS 0.25
    TCGA-RR-A6KC-01A PNKD GBM chr2 218340769 218340769 G A p.L169L synonymous_variant PASS 0.450704225
    TCGA-RR-A6KC-01A INPP5D GBM chr2 233163735 233163735 G A p.T423T synonymous_variant PASS 0.459183673