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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-KT-A7W1-01A PTPRC LGG chr1 198706873 198706873 A G p.E275E synonymous_variant PASS 0.367346939
    TCGA-KT-A7W1-01A KCNH1 LGG chr1 211133918 211133918 G A p.L10L synonymous_variant PASS 0.35
    TCGA-KT-A7W1-01A HHIPL2 LGG chr1 222522480 222522480 G A 3_prime_UTR_variant PASS 0.477272727
    TCGA-KT-A7W1-01A RRM2 LGG chr2 10210499 10210499 G A non_coding_transcript_exon_var PASS 0.319444444
    TCGA-KT-A7W1-01A LINC01317 LGG chr2 33727755 33727755 G A intron_variant;non_coding_tran PASS 0.428571429
    TCGA-KT-A7W1-01A TTN LGG chr2 178608618 178608618 T C p.K15824E missense_variant PASS 0.285714286
    TCGA-KT-A7W1-01A TTN LGG chr2 178631238 178631238 T A p.I12963F missense_variant PASS 0.357142857
    TCGA-KT-A7W1-01A PIK3CA LGG chr3 179230039 179230039 G T p.C901F missense_variant PASS 0.432291667
    TCGA-KT-A7W1-01A RBM47 LGG chr4 40438508 40438508 C T p.R129H missense_variant PASS 0.471428571
    TCGA-KT-A7W1-01A IBSP LGG chr4 87811493 87811493 C A p.T179T synonymous_variant PASS 0.515151515