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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-FG-A70Z-01A GRHL3 LGG chr1 24337115 24337115 A G p.E217G missense_variant PASS 0.289719626
    TCGA-FG-A70Z-01A SYTL1 LGG chr1 27349136 27349136 G A p.A172A synonymous_variant PASS 0.327272727
    TCGA-FG-A70Z-01A HORMAD1 LGG chr1 150704308 150704308 C T p.Q280Q synonymous_variant PASS 0.273684211
    TCGA-FG-A70Z-01A SEC16B LGG chr1 177961697 177961697 C T p.R227H missense_variant PASS 0.365384615
    TCGA-FG-A70Z-01A HMCN1 LGG chr1 186145448 186145448 G A p.R4771Q missense_variant PASS 0.427083333
    TCGA-FG-A70Z-01A PRG4 LGG chr1 186311456 186311456 G A p.R1218H missense_variant PASS 0.284518828
    TCGA-FG-A70Z-01A SLC35F3 LGG chr1 234231451 234231451 G A p.A37A synonymous_variant PASS 0.438596491
    TCGA-FG-A70Z-01A ZP4 LGG chr1 237889878 237889878 A G p.M130T missense_variant PASS 0.333333333
    TCGA-FG-A70Z-01A NCKAP5 LGG chr2 132783756 132783756 G A p.R1019* stop_gained PASS 0.327272727
    TCGA-FG-A70Z-01A SCN2A LGG chr2 165389773 165389773 C T p.D1989D synonymous_variant PASS 0.363636364