BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-FG-6692-01A ADGRL4 LGG chr1 78927069 78927069 T A p.V300V synonymous_variant PASS 0.352941176
TCGA-FG-6692-01A VCAM1 LGG chr1 100732599 100732599 A G p.T569T synonymous_variant PASS 0.425287356
TCGA-FG-6692-01A FLG2 LGG chr1 152355736 152355736 G A p.H684Y missense_variant PASS 0.38490566
TCGA-FG-6692-01A RNASEL LGG chr1 182575555 182575555 G A p.P688L missense_variant PASS 0.390625
TCGA-FG-6692-01A GREM2 LGG chr1 240493044 240493044 G A p.F144F synonymous_variant PASS 0.391752577
TCGA-FG-6692-01A SDC1 LGG chr2 20204159 20204159 G A p.P94L missense_variant PASS 0.321678322
TCGA-FG-6692-01A LRRTM4 LGG chr2 77519023 77519023 C T p.L282L synonymous_variant PASS 0.555555556
TCGA-FG-6692-01A TTN LGG chr2 178633304 178633304 C T p.K12682K synonymous_variant PASS 0.389534884
TCGA-FG-6692-01A DNAH7 LGG chr2 195855836 195855836 T A p.Q2857L missense_variant PASS 0.396011396
TCGA-FG-6692-01A CRYGB LGG chr2 208142787 208142787 C T p.V127M missense_variant PASS 0.397790055