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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-E1-A7YD-01A AADACL3 LGG chr1 12725526 12725526 T - p.Q198Kfs*14 frameshift_variant PASS 0.201834862
    TCGA-E1-A7YD-01A PRAMEF19 LGG chr1 13369359 13369359 C T p.C314Y missense_variant PASS 0.347222222
    TCGA-E1-A7YD-01A TMCO4 LGG chr1 19745531 19745531 C T p.X293_splice splice_donor_variant PASS 0.22962963
    TCGA-E1-A7YD-01A LAPTM5 LGG chr1 30738946 30738946 G T p.N168K missense_variant PASS 0.35
    TCGA-E1-A7YD-01A IPO13 LGG chr1 43949910 43949910 G A p.S193N missense_variant PASS 0.580645161
    TCGA-E1-A7YD-01A DNASE2B LGG chr1 84414708 84414708 G A p.C309Y missense_variant PASS 0.239130435
    TCGA-E1-A7YD-01A FGFR1 LGG chr1 152312215 152312215 T G p.S891R missense_variant PASS 0.201309329
    TCGA-E1-A7YD-01A OR10R2 LGG chr1 158480503 158480503 G T p.C209F missense_variant PASS 0.382882883
    TCGA-E1-A7YD-01A LEMD1 LGG chr1 205381661 205381661 A T p.G181G synonymous_variant PASS 0.140939597
    TCGA-E1-A7YD-01A RYR2 LGG chr1 237595559 237595559 C T p.R1500C missense_variant PASS 0.4375