BrainBase a curated knowledgebase for brain diseases

  • Home
  • Variation
    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-DU-A7TD-01A KIF1B LGG chr1 10376559 10376559 G A p.R1808H missense_variant PASS 0.367816092
    TCGA-DU-A7TD-01A RPS6KA1 LGG chr1 26561626 26561626 C - p.I519Lfs*18 frameshift_variant PASS 0.293333333
    TCGA-DU-A7TD-01A MTF2 LGG chr1 93137119 93137119 A - 3_prime_UTR_variant PASS 0.285714286
    TCGA-DU-A7TD-01A EXTL2 LGG chr1 100877533 100877533 G T p.Q126K missense_variant PASS 0.523809524
    TCGA-DU-A7TD-01A CD1E LGG chr1 158354541 158354541 C T p.R75C missense_variant PASS 0.339285714
    TCGA-DU-A7TD-01A TOGARAM2 LGG chr2 29036612 29036612 C T p.F830F synonymous_variant PASS 0.4
    TCGA-DU-A7TD-01A VPS54 LGG chr2 63965931 63965931 G T p.S176S synonymous_variant PASS 0.596774194
    TCGA-DU-A7TD-01A IL18RAP LGG chr2 102424085 102424085 C T p.T115T synonymous_variant PASS 0.388888889
    TCGA-DU-A7TD-01A TNP1 LGG chr2 216859907 216859907 C T p.R43Q missense_variant PASS 0.34351145
    TCGA-DU-A7TD-01A OR6B3 LGG chr2 240045777 240045777 G A p.T99M missense_variant PASS 0.44