BrainBase
a curated knowledgebase for brain diseases
| Sample ID | Gene Symbol | Glioma Grade | Chr | Start Site | End Site | RET | ALT | Amino Acid Change | Effect | Filter | DNA VAF |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-DU-A5TT-01A | PLEKHG5 | LGG | chr1 | 6474036 | 6474036 | G | A | p.R246C | missense_variant | PASS | 0.24137931 |
| TCGA-DU-A5TT-01A | IL22RA1 | LGG | chr1 | 24137183 | 24137183 | C | T | p.A101A | synonymous_variant | PASS | 0.337662338 |
| TCGA-DU-A5TT-01A | PTAFR | LGG | chr1 | 28150633 | 28150633 | G | A | p.T130I | missense_variant | PASS | 0.474452555 |
| TCGA-DU-A5TT-01A | PTGFR | LGG | chr1 | 78536751 | 78536751 | A | T | 3_prime_UTR_variant | PASS | 0.461538462 | |
| TCGA-DU-A5TT-01A | OR10R2 | LGG | chr1 | 158480024 | 158480024 | A | G | p.V49V | synonymous_variant | PASS | 0.522727273 |
| TCGA-DU-A5TT-01A | NIBAN1 | LGG | chr1 | 184795326 | 184795326 | C | T | p.G813E | missense_variant | PASS | 0.186335404 |
| TCGA-DU-A5TT-01A | NFASC | LGG | chr1 | 204977700 | 204977700 | T | A | p.T617T | synonymous_variant | PASS | 0.369565217 |
| TCGA-DU-A5TT-01A | TRAF3IP3 | LGG | chr1 | 209779392 | 209779392 | C | T | intron_variant | PASS | 0.5 | |
| TCGA-DU-A5TT-01A | DRC1 | LGG | chr2 | 26421394 | 26421394 | G | A | p.R117H | missense_variant | PASS | 0.212121212 |
| TCGA-DU-A5TT-01A | IFRD2 | LGG | chr3 | 50289723 | 50289723 | C | T | p.A260T | missense_variant | PASS | 0.5 |