BrainBase
a curated knowledgebase for brain diseases
| Sample ID |
Gene Symbol |
Glioma Grade |
Chr |
Start Site |
End Site |
RET |
ALT |
Amino Acid Change |
Effect |
Filter |
DNA VAF |
| TCGA-DU-7292-01A |
ARHGEF16 |
LGG |
chr1 |
3477893 |
3477893 |
G |
A |
p.A498T |
missense_variant |
PASS |
0.260869565 |
| TCGA-DU-7292-01A |
ADCY10 |
LGG |
chr1 |
167822027 |
167822027 |
A |
T |
p.I1428N |
missense_variant |
PASS |
0.291666667 |
| TCGA-DU-7292-01A |
TNNI1 |
LGG |
chr1 |
201415218 |
201415218 |
G |
A |
p.L18L |
synonymous_variant |
PASS |
0.206896552 |
| TCGA-DU-7292-01A |
HGD |
LGG |
chr3 |
120641661 |
120641661 |
G |
A |
p.H269H |
synonymous_variant |
PASS |
0.243589744 |
| TCGA-DU-7292-01A |
ENAM |
LGG |
chr4 |
70643680 |
70643680 |
G |
T |
p.A752S |
missense_variant |
PASS |
0.333333333 |
| TCGA-DU-7292-01A |
ADAMTS3 |
LGG |
chr4 |
72568749 |
72568749 |
G |
C |
p.S5* |
stop_gained |
PASS |
0.388888889 |
| TCGA-DU-7292-01A |
CXCL9 |
LGG |
chr4 |
76006250 |
76006250 |
C |
T |
p.R30H |
missense_variant |
PASS |
0.293233083 |
| TCGA-DU-7292-01A |
SEC24D |
LGG |
chr4 |
118815468 |
118815468 |
C |
A |
p.G219V |
missense_variant |
PASS |
0.368421053 |
| TCGA-DU-7292-01A |
CLCN3 |
LGG |
chr4 |
169680081 |
169680081 |
C |
T |
p.S64S |
synonymous_variant |
PASS |
0.298245614 |
| TCGA-DU-7292-01A |
MTRR |
LGG |
chr5 |
7875264 |
7875264 |
G |
A |
p.G124D |
missense_variant |
PASS |
0.366666667 |
