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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-81-5910-01A HMGB4 GBM chr1 33864672 33864672 C T p.R161C missense_variant PASS 0.326086957
    TCGA-81-5910-01A STK40 GBM chr1 36355303 36355303 T C p.N158S missense_variant PASS 0.424603175
    TCGA-81-5910-01A CTPS1 GBM chr1 40996032 40996033 - A p.M281Nfs*10 frameshift_variant PASS 0.375
    TCGA-81-5910-01A IFI44L GBM chr1 78628970 78628970 C T p.D166D synonymous_variant PASS 0.416666667
    TCGA-81-5910-01A OR6N1 GBM chr1 158766154 158766154 C T p.V177I missense_variant PASS 0.397959184
    TCGA-81-5910-01A NECTIN4 GBM chr1 161072625 161072625 A G 3_prime_UTR_variant PASS 0.242424242
    TCGA-81-5910-01A USH2A GBM chr1 216246617 216246617 C T p.R926H missense_variant PASS 0.38
    TCGA-81-5910-01A OR2L2 GBM chr1 248038791 248038792 - T p.C178Lfs*2 frameshift_variant PASS 0.30994152
    TCGA-81-5910-01A AFF3 GBM chr2 99593392 99593392 G C p.L757V missense_variant PASS 0.382352941
    TCGA-81-5910-01A SCN9A GBM chr2 166305835 166305835 G A p.R185C missense_variant PASS 0.294117647