BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-32-2632-01A ABCD3 GBM chr1 94487917 94487917 T C p.L364P missense_variant PASS 0.103092784
TCGA-32-2632-01A NOTCH2 GBM chr1 119922326 119922326 G C p.S1708C missense_variant PASS 0.281690141
TCGA-32-2632-01A FGFR1 GBM chr1 152306339 152306339 G A p.D2849D synonymous_variant PASS 0.152409046
TCGA-32-2632-01A FGFR1 GBM chr1 152308416 152308416 G A p.S2157L missense_variant PASS 0.35786802
TCGA-32-2632-01A SPTA1 GBM chr1 158644390 158644390 G C p.Q1401E missense_variant PASS 0.25
TCGA-32-2632-01A ASPM GBM chr1 197143444 197143444 A G p.S270P missense_variant PASS 0.422680412
TCGA-32-2632-01A QPCT GBM chr2 37372388 37372388 G A p.D286N missense_variant PASS 0.248995984
TCGA-32-2632-01A IGKV3D-11 GBM chr2 90173248 90173248 G T p.G61C missense_variant PASS 0.166666667
TCGA-32-2632-01A SLC5A7 GBM chr2 107997931 107997931 T A p.L181H missense_variant PASS 0.393728223
TCGA-32-2632-01A CNTNAP5 GBM chr2 124772808 124772808 A G p.E847G missense_variant PASS 0.216