Sample ID | Gene Symbol | Glioma Grade | Chr | Start Site | End Site | RET | ALT | Amino Acid Change | Effect | Filter | DNA VAF |
---|---|---|---|---|---|---|---|---|---|---|---|
TCGA-32-2632-01A | ABCD3 | GBM | chr1 | 94487917 | 94487917 | T | C | p.L364P | missense_variant | PASS | 0.103092784 |
TCGA-32-2632-01A | NOTCH2 | GBM | chr1 | 119922326 | 119922326 | G | C | p.S1708C | missense_variant | PASS | 0.281690141 |
TCGA-32-2632-01A | FGFR1 | GBM | chr1 | 152306339 | 152306339 | G | A | p.D2849D | synonymous_variant | PASS | 0.152409046 |
TCGA-32-2632-01A | FGFR1 | GBM | chr1 | 152308416 | 152308416 | G | A | p.S2157L | missense_variant | PASS | 0.35786802 |
TCGA-32-2632-01A | SPTA1 | GBM | chr1 | 158644390 | 158644390 | G | C | p.Q1401E | missense_variant | PASS | 0.25 |
TCGA-32-2632-01A | ASPM | GBM | chr1 | 197143444 | 197143444 | A | G | p.S270P | missense_variant | PASS | 0.422680412 |
TCGA-32-2632-01A | QPCT | GBM | chr2 | 37372388 | 37372388 | G | A | p.D286N | missense_variant | PASS | 0.248995984 |
TCGA-32-2632-01A | IGKV3D-11 | GBM | chr2 | 90173248 | 90173248 | G | T | p.G61C | missense_variant | PASS | 0.166666667 |
TCGA-32-2632-01A | SLC5A7 | GBM | chr2 | 107997931 | 107997931 | T | A | p.L181H | missense_variant | PASS | 0.393728223 |
TCGA-32-2632-01A | CNTNAP5 | GBM | chr2 | 124772808 | 124772808 | A | G | p.E847G | missense_variant | PASS | 0.216 |