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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-28-1757-01A PRAMEF2 GBM chr1 12860143 12860143 G A p.T246T synonymous_variant PASS 0.430420712
    TCGA-28-1757-01A COL16A1 GBM chr1 31665588 31665588 G A p.P1163S missense_variant PASS 0.339285714
    TCGA-28-1757-01A NCDN GBM chr1 35560489 35560489 G A p.C113Y missense_variant PASS 0.148514851
    TCGA-28-1757-01A RLF GBM chr1 40237137 40237137 A G p.Y812C missense_variant PASS 0.58974359
    TCGA-28-1757-01A SZT2 GBM chr1 43437195 43437195 C T p.A1963V missense_variant PASS 0.489690722
    TCGA-28-1757-01A ST3GAL3 GBM chr1 43920427 43920427 A C p.K256N missense_variant PASS 0.12195122
    TCGA-28-1757-01A MUTYH GBM chr1 45329317 45329317 C T p.A544T missense_variant PASS 0.818867925
    TCGA-28-1757-01A SPATA6 GBM chr1 48359714 48359714 C A p.E322D missense_variant PASS 0.25862069
    TCGA-28-1757-01A C8A GBM chr1 56867619 56867619 C T p.R30W missense_variant PASS 0.427350427
    TCGA-28-1757-01A RTCA GBM chr1 100281261 100281261 G A intron_variant PASS 0.214285714