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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-28-1752-01A PRAMEF17 GBM chr1 13392026 13392026 C A p.P317T missense_variant PASS 0.172268908
    TCGA-28-1752-01A STPG1 GBM chr1 24401360 24401360 C T p.R10H missense_variant PASS 0.273333333
    TCGA-28-1752-01A PBXIP1 GBM chr1 154946077 154946077 C T p.G533S missense_variant PASS 0.271889401
    TCGA-28-1752-01A TRAF3IP3 GBM chr1 209762572 209762572 T A p.C135S missense_variant PASS 0.101754386
    TCGA-28-1752-01A USH2A GBM chr1 215743280 215743280 A G p.S3815S synonymous_variant PASS 0.107981221
    TCGA-28-1752-01A HS1BP3 GBM chr2 20618971 20618971 G A 3_prime_UTR_variant PASS 0.380952381
    TCGA-28-1752-01A LMAN2L GBM chr2 96734504 96734504 T G p.E110A missense_variant PASS 0.445414847
    TCGA-28-1752-01A TBR1 GBM chr2 161417723 161417723 C T p.T247M missense_variant PASS 0.1
    TCGA-28-1752-01A WIPF1 GBM chr2 174567152 174567152 C T p.P458P synonymous_variant PASS 0.133333333
    TCGA-28-1752-01A CNTN4 GBM chr3 2866805 2866805 C T p.R170C missense_variant PASS 0.11001642