BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-19-5956-01A OR4F5 GBM chr1 69666 69666 C T p.V192V synonymous_variant PASS 0.193548387
TCGA-19-5956-01A OR4F5 GBM chr1 69770 69770 C T p.S227F missense_variant PASS 0.344827586
TCGA-19-5956-01A NOC2L GBM chr1 946191 946191 C A p.E633D missense_variant PASS 0.11627907
TCGA-19-5956-01A NOC2L GBM chr1 955947 955947 C T p.G225E missense_variant PASS 0.162790698
TCGA-19-5956-01A TNFRSF18 GBM chr1 1205476 1205476 G A p.S68S synonymous_variant PASS 0.113207547
TCGA-19-5956-01A SCNN1D GBM chr1 1286865 1286865 G A p.A173T missense_variant PASS 0.289473684
TCGA-19-5956-01A ACAP3 GBM chr1 1299408 1299408 C T intron_variant PASS 0.388888889
TCGA-19-5956-01A DVL1 GBM chr1 1339738 1339738 C T p.T328T splice_region_variant;synonymo PASS 0.1875
TCGA-19-5956-01A CCNL2 GBM chr1 1395487 1395487 T A p.Q167H missense_variant PASS 0.118181818
TCGA-19-5956-01A ATAD3B GBM chr1 1482172 1482172 G T p.K183N missense_variant PASS 0.269230769