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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-16-1048-01B CFAP74 GBM chr1 1970694 1970694 G A p.H337H synonymous_variant PASS 0.2
    TCGA-16-1048-01B ECHDC2 GBM chr1 52904790 52904790 C T p.A186A synonymous_variant PASS 0.325301205
    TCGA-16-1048-01B AMY2B GBM chr1 103573085 103573088 TAAT - p.N115Ifs*7 frameshift_variant PASS 0.192899408
    TCGA-16-1048-01B CD1C GBM chr1 158291331 158291331 T - p.L87Yfs*9 frameshift_variant PASS 0.3125
    TCGA-16-1048-01B OR6K2 GBM chr1 158699999 158699999 G A p.S218S synonymous_variant PASS 0.326666667
    TCGA-16-1048-01B CNTN2 GBM chr1 205073688 205073688 C T p.R1016C missense_variant PASS 0.197183099
    TCGA-16-1048-01B BIRC6 GBM chr2 32502830 32502830 A T p.L3081F missense_variant PASS 0.273809524
    TCGA-16-1048-01B SLC4A5 GBM chr2 74250510 74250510 C T p.G496S missense_variant PASS 0.248062016
    TCGA-16-1048-01B IL18RAP GBM chr2 102424331 102424331 C T p.L166F missense_variant PASS 0.335664336
    TCGA-16-1048-01B TMEM87B GBM chr2 112107839 112107839 G A p.V526I missense_variant;splice_region PASS 0.261904762