Sample ID | Gene Symbol | Glioma Grade | Chr | Start Site | End Site | RET | ALT | Amino Acid Change | Effect | Filter | DNA VAF |
---|---|---|---|---|---|---|---|---|---|---|---|
TCGA-14-2554-01A | PEX14 | GBM | chr1 | 10495290 | 10495290 | G | A | p.G18E | missense_variant | PASS | 0.283783784 |
TCGA-14-2554-01A | PRAMEF2 | GBM | chr1 | 12860117 | 12860117 | G | A | p.V238I | missense_variant | PASS | 0.376811594 |
TCGA-14-2554-01A | S100A10 | GBM | chr1 | 151983130 | 151983130 | C | T | 3_prime_UTR_variant | PASS | 0.352769679 | |
TCGA-14-2554-01A | TCHHL1 | GBM | chr1 | 152086227 | 152086227 | G | A | p.N485N | synonymous_variant | PASS | 0.34537246 |
TCGA-14-2554-01A | RGS21 | GBM | chr1 | 192352137 | 192352137 | C | T | p.T60M | missense_variant | PASS | 0.377777778 |
TCGA-14-2554-01A | CCNQP1 | GBM | chr1 | 200214103 | 200214103 | C | G | non_coding_transcript_exon_var | PASS | 0.326086957 | |
TCGA-14-2554-01A | KCNH1 | GBM | chr1 | 211018953 | 211018953 | G | A | p.R288C | missense_variant | PASS | 0.341708543 |
TCGA-14-2554-01A | OBSCN | GBM | chr1 | 228292010 | 228292010 | G | A | p.G3484G | synonymous_variant | PASS | 0.447058824 |
TCGA-14-2554-01A | OR2T6 | GBM | chr1 | 248388218 | 248388218 | G | A | p.V204I | missense_variant | PASS | 0.287356322 |
TCGA-14-2554-01A | PSD4 | GBM | chr2 | 113197564 | 113197564 | C | T | p.T796M | missense_variant;splice_region | PASS | 0.338235294 |