Sample ID | Gene Symbol | Glioma Grade | Chr | Start Site | End Site | RET | ALT | Amino Acid Change | Effect | Filter | DNA VAF |
---|---|---|---|---|---|---|---|---|---|---|---|
TCGA-14-1829-01A | EXOSC10 | GBM | chr1 | 11091562 | 11091562 | C | G | p.K136N | missense_variant | PASS | 0.326315789 |
TCGA-14-1829-01A | UBIAD1 | GBM | chr1 | 11273945 | 11273945 | C | G | p.L138L | synonymous_variant | PASS | 0.297520661 |
TCGA-14-1829-01A | TRIM62 | GBM | chr1 | 33181181 | 33181181 | G | C | p.L84L | synonymous_variant | PASS | 0.333333333 |
TCGA-14-1829-01A | PKMP1 | GBM | chr1 | 114536019 | 114536019 | G | A | non_coding_transcript_exon_var | PASS | 0.333333333 | |
TCGA-14-1829-01A | TCHH | GBM | chr1 | 152108352 | 152108352 | C | T | p.R1622H | missense_variant | PASS | 0.341040462 |
TCGA-14-1829-01A | SLAMF6 | GBM | chr1 | 160486712 | 160486712 | C | T | p.V332M | missense_variant | PASS | 0.292929293 |
TCGA-14-1829-01A | KLHDC8A | GBM | chr1 | 205343479 | 205343479 | G | A | p.N42N | synonymous_variant | PASS | 0.265625 |
TCGA-14-1829-01A | RAB3GAP2 | GBM | chr1 | 220167607 | 220167607 | C | A | p.A959S | missense_variant | PASS | 0.34375 |
TCGA-14-1829-01A | HHIPL2 | GBM | chr1 | 222544160 | 222544160 | G | A | p.Y117Y | synonymous_variant | PASS | 0.386363636 |
TCGA-14-1829-01A | NUP133 | GBM | chr1 | 229470724 | 229470724 | G | A | p.A644A | synonymous_variant | PASS | 0.302325581 |