BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-14-1829-01A EXOSC10 GBM chr1 11091562 11091562 C G p.K136N missense_variant PASS 0.326315789
TCGA-14-1829-01A UBIAD1 GBM chr1 11273945 11273945 C G p.L138L synonymous_variant PASS 0.297520661
TCGA-14-1829-01A TRIM62 GBM chr1 33181181 33181181 G C p.L84L synonymous_variant PASS 0.333333333
TCGA-14-1829-01A PKMP1 GBM chr1 114536019 114536019 G A non_coding_transcript_exon_var PASS 0.333333333
TCGA-14-1829-01A TCHH GBM chr1 152108352 152108352 C T p.R1622H missense_variant PASS 0.341040462
TCGA-14-1829-01A SLAMF6 GBM chr1 160486712 160486712 C T p.V332M missense_variant PASS 0.292929293
TCGA-14-1829-01A KLHDC8A GBM chr1 205343479 205343479 G A p.N42N synonymous_variant PASS 0.265625
TCGA-14-1829-01A RAB3GAP2 GBM chr1 220167607 220167607 C A p.A959S missense_variant PASS 0.34375
TCGA-14-1829-01A HHIPL2 GBM chr1 222544160 222544160 G A p.Y117Y synonymous_variant PASS 0.386363636
TCGA-14-1829-01A NUP133 GBM chr1 229470724 229470724 G A p.A644A synonymous_variant PASS 0.302325581