BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-14-1456-01B SDCCAG8 GBM chr1 243344272 243344272 G A p.E472K missense_variant PASS 0.440677966
TCGA-14-1456-01B IDH1 GBM chr2 208248388 208248388 C T p.R132H missense_variant PASS 0.278195489
TCGA-14-1456-01B SPP2 GBM chr2 234058859 234058859 C G p.N78K missense_variant PASS 0.352941176
TCGA-14-1456-01B PER2 GBM chr2 238249118 238249118 G A p.R1188C missense_variant PASS 0.417721519
TCGA-14-1456-01B PIK3R1 GBM chr5 68293319 68293319 A G p.K379E missense_variant PASS 0.209876543
TCGA-14-1456-01B ARSK GBM chr5 95601026 95601026 T C p.Y426H missense_variant PASS 0.420408163
TCGA-14-1456-01B CD2AP GBM chr6 47579442 47579442 C T p.P321S missense_variant PASS 0.330097087
TCGA-14-1456-01B EGFR GBM chr7 55151328 55151328 C T p.S198S synonymous_variant PASS 0.232067511
TCGA-14-1456-01B EGFR GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.238461538
TCGA-14-1456-01B SULF1 GBM chr8 69576000 69576000 A C p.K68T missense_variant PASS 0.184615385