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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-12-3650-01A FOXJ3 GBM chr1 42227885 42227885 G A p.R176W missense_variant;splice_region PASS 0.416666667
    TCGA-12-3650-01A COL11A1 GBM chr1 103021757 103021757 C A p.G420C missense_variant PASS 0.290322581
    TCGA-12-3650-01A HSPA6 GBM chr1 161525667 161525667 G A p.V337I missense_variant PASS 0.540983607
    TCGA-12-3650-01A CFHR2 GBM chr1 196957980 196957980 G T p.V174F missense_variant PASS 0.439490446
    TCGA-12-3650-01A PLB1 GBM chr2 28518496 28518496 C A p.P50T missense_variant PASS 0.349693252
    TCGA-12-3650-01A STK32B GBM chr4 5460106 5460106 C T p.L263L synonymous_variant PASS 0.37755102
    TCGA-12-3650-01A ADH1B GBM chr4 99311542 99311542 A C p.W315G missense_variant PASS 0.457489879
    TCGA-12-3650-01A TACR3 GBM chr4 103719201 103719201 G A p.R159C missense_variant PASS 0.458333333
    TCGA-12-3650-01A VEGFC GBM chr4 176729713 176729713 G A p.R61W missense_variant PASS 0.445783133
    TCGA-12-3650-01A PLEKHG4B GBM chr5 140590 140590 C T p.Q95* stop_gained PASS 0.47826087