Sample ID | Gene Symbol | Glioma Grade | Chr | Start Site | End Site | RET | ALT | Amino Acid Change | Effect | Filter | DNA VAF |
---|---|---|---|---|---|---|---|---|---|---|---|
TCGA-12-1600-01A | TNFRSF8 | GBM | chr1 | 12110124 | 12110124 | G | A | p.R199H | missense_variant | PASS | 0.515151515 |
TCGA-12-1600-01A | UBXN10 | GBM | chr1 | 20190996 | 20190996 | C | A | p.I145I | synonymous_variant | PASS | 0.467741935 |
TCGA-12-1600-01A | UBXN11 | GBM | chr1 | 26284246 | 26284246 | C | G | p.X325_splice | splice_acceptor_variant | PASS | 0.347826087 |
TCGA-12-1600-01A | ZZZ3 | GBM | chr1 | 77565624 | 77565624 | G | A | 3_prime_UTR_variant | PASS | 0.376344086 | |
TCGA-12-1600-01A | RORC | GBM | chr1 | 151816718 | 151816718 | G | A | p.R82* | stop_gained | PASS | 0.565217391 |
TCGA-12-1600-01A | TCHHL1 | GBM | chr1 | 152084983 | 152084983 | C | T | p.S900N | missense_variant | PASS | 0.403921569 |
TCGA-12-1600-01A | PGLYRP4 | GBM | chr1 | 153340500 | 153340500 | A | G | p.Y235Y | synonymous_variant | PASS | 0.393617021 |
TCGA-12-1600-01A | NECTIN4 | GBM | chr1 | 161077642 | 161077642 | C | T | p.V181M | missense_variant | PASS | 0.475 |
TCGA-12-1600-01A | AXDND1 | GBM | chr1 | 179445023 | 179445023 | C | T | p.Y539Y | synonymous_variant | PASS | 0.421052632 |
TCGA-12-1600-01A | PPP1CB | GBM | chr2 | 28778920 | 28778920 | C | G | p.S99C | missense_variant | PASS | 0.207792208 |