BrainBase a curated knowledgebase for brain diseases

  • Home
  • Variation
    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-12-0670-01B CLCNKB GBM chr1 16044577 16044577 C T p.R29C missense_variant PASS 0.476190476
    TCGA-12-0670-01B DHCR24 GBM chr1 54854046 54854046 G A p.N403N synonymous_variant PASS 0.459459459
    TCGA-12-0670-01B MAGI3 GBM chr1 113642045 113642045 G T p.D499Y missense_variant PASS 0.449856734
    TCGA-12-0670-01B NPR1 GBM chr1 153687304 153687304 G A p.G680G synonymous_variant PASS 0.44610624
    TCGA-12-0670-01B SEMA4A GBM chr1 156158751 156158751 G A p.S165S synonymous_variant PASS 0.363636364
    TCGA-12-0670-01B OR2T33 GBM chr1 248273135 248273135 C T p.R227H missense_variant PASS 0.388888889
    TCGA-12-0670-01B OR2G6 GBM chr1 248521847 248521847 G A p.S67S synonymous_variant PASS 0.425373134
    TCGA-12-0670-01B KIDINS220 GBM chr2 8798234 8798235 - T p.Q323Tfs*5 frameshift_variant PASS 0.433962264
    TCGA-12-0670-01B DYSF GBM chr2 71679237 71679237 T C p.X1982_splice splice_donor_variant PASS 0.6
    TCGA-12-0670-01B LCT GBM chr2 135808630 135808630 C T p.S1239S synonymous_variant PASS 0.490842491