BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-12-0657-01A DENND2D GBM chr1 111189242 111189242 G A p.V328V synonymous_variant PASS 0.112299465
TCGA-12-0657-01A CHIAP2 GBM chr1 111281690 111281690 G A non_coding_transcript_exon_var PASS 0.378571429
TCGA-12-0657-01A VANGL1 GBM chr1 115685512 115685512 C T p.N433N synonymous_variant PASS 0.38
TCGA-12-0657-01A FGFR1 GBM chr1 152304582 152304582 C T p.R3435H missense_variant PASS 0.401844532
TCGA-12-0657-01A KPRP GBM chr1 152760487 152760487 G A p.R300H missense_variant PASS 0.454545455
TCGA-12-0657-01A IL6R GBM chr1 154429254 154429254 G A p.P48P synonymous_variant PASS 0.127659574
TCGA-12-0657-01A CFH GBM chr1 196726644 196726644 T A p.V683E missense_variant PASS 0.427576602
TCGA-12-0657-01A OR2M4 GBM chr1 248239172 248239172 A C p.I82L missense_variant PASS 0.441140025
TCGA-12-0657-01A OR14I1 GBM chr1 248682171 248682171 G A p.A45V missense_variant PASS 0.414746544
TCGA-12-0657-01A ACTR3 GBM chr2 113934329 113934329 G A p.R161R synonymous_variant PASS 0.305216426