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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-06-5416-01A FAM41C GBM chr1 874360 874360 T G non_coding_transcript_exon_var PASS 0.475675676
    TCGA-06-5416-01A SAMD11 GBM chr1 943298 943298 C T p.P537L missense_variant PASS 0.107692308
    TCGA-06-5416-01A PLEKHN1 GBM chr1 970862 970862 C A p.L196L synonymous_variant PASS 0.220338983
    TCGA-06-5416-01A AGRN GBM chr1 1047657 1047657 C T p.R1201C missense_variant PASS 0.162650602
    TCGA-06-5416-01A AGRN GBM chr1 1049584 1049584 C T p.F1511F synonymous_variant PASS 0.421052632
    TCGA-06-5416-01A TTLL10 GBM chr1 1181745 1181745 G T p.E254* stop_gained PASS 0.304347826
    TCGA-06-5416-01A TNFRSF18 GBM chr1 1203601 1203601 A G 3_prime_UTR_variant PASS 0.138888889
    TCGA-06-5416-01A C1QTNF12 GBM chr1 1244387 1244387 C A p.K96N missense_variant PASS 0.263157895
    TCGA-06-5416-01A SCNN1D GBM chr1 1290511 1290511 G T p.E441D missense_variant PASS 0.239819005
    TCGA-06-5416-01A PUSL1 GBM chr1 1309515 1309515 A G p.T129A missense_variant PASS 0.46875