BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-06-0747-01A KIF17 GBM chr1 20704579 20704579 G A p.R331W missense_variant PASS 0.3359375
TCGA-06-0747-01A ASB17 GBM chr1 75932295 75932295 T C 5_prime_UTR_variant PASS 0.5
TCGA-06-0747-01A ADGRL4 GBM chr1 78946348 78946348 C G p.C84S missense_variant PASS 0.5
TCGA-06-0747-01A ABCA4 GBM chr1 94077811 94077811 A T p.I478N missense_variant PASS 0.492481203
TCGA-06-0747-01A ATP1A2 GBM chr1 160136366 160136366 G C p.Q853H missense_variant PASS 0.375
TCGA-06-0747-01A STYXL2 GBM chr1 167094879 167094879 G A p.E10E synonymous_variant PASS 0.461538462
TCGA-06-0747-01A STYXL2 GBM chr1 167125945 167125945 C T p.R272W missense_variant PASS 0.409090909
TCGA-06-0747-01A NLRP3 GBM chr1 247424233 247424233 G T p.V264L missense_variant PASS 0.483443709
TCGA-06-0747-01A AC083899.3 GBM chr2 87181066 87181066 G A splice_region_variant;non_codi PASS 0.205882353
TCGA-06-0747-01A SLC9A4 GBM chr2 102478997 102478997 G A p.V139I missense_variant PASS 0.34965035