BIG Search

BIG Search is a scalable text search engine built based on ElasticSearch (a highly scalable open-source full-text search and analytics engine based on Apache Lucene). It features cross-domain search and facilitates users to gain access to a wide range of biomedical data, not only from BIGD databases but also partner databases throughout the world.

e.g., PRJCA000126;SAMC000385;tp53;EGFR; human; KaKs_Calculator; GenBank

All databases: 4654689

BioProject: Linkage analysis on microtia

  • Accession: PRJCA000150
  • Title: Linkage analysis on microtia
  • Description: Genome-wide linkage analysis on a microtia pedigree
  • Samples: SAMC003107
  • BasicInfo : PRJCA000150; Phenotype or Genotype; Medical

BioProject: Healthy

  • Accession: PRJCA001292
  • Title: Healthy
  • Description: Human Healthy
  • BasicInfo : PRJCA001292; Whole genome sequencing; Medical

BioProject: human iPSC exome


BioProject: Human Blastocyst Methylome

  • Accession: PRJCA000248
  • Title: Human Blastocyst Methylome
  • Description: We performed whole genome bisulfite sequencing (WGBS) for 57 blastocysts and 29 trophectoderm samples with different morphological grades during assisted reproductive technology(ART) practices.
  • Samples: SAMC047402 SAMC044702 SAMC044701 SAMC018834 SAMC017372 SAMC017371 more
  • GSAs: CRA000114 CRA001056
  • BasicInfo : PRJCA000248; Epigenomics; Medical

BioProject: The candidate gene analysis for human facial morphology in Eurasian population

  • Accession: PRJCA001171
  • Title: The candidate gene analysis for human facial morphology in Eurasian population
  • Description: To Explore the genetic mechanisms of human facial morphology, Several variants for about 700 Uyghur individuals were genotyped on Illumina Infinium Global Screening Array 650K. At the same time, various of facial phenotypes were derived from all sample.
  • Samples: SAMC052426 SAMC052425 SAMC052424 SAMC052423 SAMC052422 SAMC052421 more
  • BasicInfo : PRJCA001171; Variation; Human genetic

BioProject: Human mitochondrial genome sequence project

  • Accession: PRJCA000216
  • Title: Human mitochondrial genome sequence project
  • Description: Sequenced mitochondrial genome for different tissue of human in order to find the hetero genotype
  • Samples: SAMC004504
  • GSAs: CRA000090
  • BasicInfo : PRJCA000216; Whole genome sequencing; Medical

BioProject: WGS of mucosal melanoma

  • Accession: PRJCA000908
  • Title: WGS of mucosal melanoma
  • Description: Mucosal melanomas (MMs) are one of the deadliest sub-types of melanoma and has a greater incidence in East-Asian population. Few therapeutic approaches have been shown to improve outcomes specifically in patients with MM. To understand the genetic underlying of MMs, our project has gained a relatively large set of MM samples for whole-genome sequencing (WGS). We hope our study could provide insights into the genomic aberrations associated with MM and demonstrate how these insights can inform triage of patients for effective precision cancer treatments.
  • BasicInfo : PRJCA000908; Whole genome sequencing; Medical

BioProject: Transcriptional program in hydroquinone treated-U2OS cells

  • Accession: PRJCA000758
  • Title: Transcriptional program in hydroquinone treated-U2OS cells
  • Description: Benzene as a known human cancinogen can directly induce genetic lesion. However, the effect of benzene metabolites on DNA repair has been rarely studied, and the biological mechanisms of that was also unclear. To explore the impact of benzene metabolite on DNA repair, we used human osteosarcoma U2OS cells containing stably integrated repair substrate for homologous repair to be treated with benzene metabolite hydroquinone.
  • Samples: SAMC021028
  • BasicInfo : PRJCA000758; Transcriptome or Gene expression; Environmental

BioProject: scRNA-seq of human early stage LUADs

  • Accession: PRJCA001316
  • Title: scRNA-seq of human early stage LUADs
  • Description: We performed large scale single cell RNA seq of two Chinese female stage 1 lung adenocarcinomas. The results unveils the inter patient and intratumoral heterogeneity of this disease.
  • Samples: SAMC063830 SAMC063829 SAMC063824 SAMC063823
  • BasicInfo : PRJCA001316; Whole genome sequencing Transcriptome or Gene expression; Medical

BioProject: the RNAseq data of human pancreas

  • Accession: PRJCA001084
  • Title: the RNAseq data of human pancreas
  • Description: This project aims to illustrate the effects of cold and warm ischemia time on human pancreatic tissue.Sequencing results illustrate the effects of different ischemic times on tissue genes.
  • BasicInfo : PRJCA001084; Transcriptome or Gene expression; Medical