BIG Search

BIG Search is a scalable text search engine built based on ElasticSearch (a highly scalable open-source full-text search and analytics engine based on Apache Lucene). It features cross-domain search and facilitates users to gain access to a wide range of biomedical data, not only from BIGD databases but also partner databases throughout the world.

e.g., PRJCA000126;SAMC000385;tp53;EGFR; human; KaKs_Calculator; GenBank

All databases: 83

Database: GenBank:GenBank

  • Short name: GenBank
  • Description: GenBank is a comprehensive database that contains publicly available DNA sequences for more than
  • Full name: GenBank
  • URL: http://www.ncbi.nlm.nih.gov/genbank/

Database: ITS2 Database:Internal Transcribed Spacer 2 Database

  • Description: ITS2 Database holds information about sequence, structure and taxonomic classification of all ITS2 in GenBank.

Database: Virgil:The new Virgil database

  • Description: Virgil is a prototype database that contains rich links between GDB genes and Genbank sequences.

Database: EnvDB:

  • Description: EnvDB is a database that classifies the environmental samples and their associated 16S rDNA sequences currently stored in GenBank.

Database: IGD:intronless genes database

  • Description: IGD is a collection of gene sequences that are annotated as having a single exon structure in GenBank feature table.

Database: PlantTA:TIGR Plant Transcript Assemblies (TA) database

  • Description: PlantTA uses expressed sequences collected from the NCBI GenBank Nucleotide database for the construction of transcript assemblies.

Database: MamPol:Mammalia Polymorphism Database

  • Description: MamPol is a website containing all the well-annotated polymorphic sequences available in GenBank

Database: XenDB:Xenopus laevis Database

  • Description: XenDB is a database of clustered ESTs and mRNAs of Xenopus laevis. Sequences were obtained from public databases (GenBank) and clustered using Vmatch.

Database: DBG2I:Database for bacterial group II introns

  • Description: Database for bacterial group II introns provides a catalogue of full-length,non-redundant group II introns present in bacterial DNA sequences in GenBank.

Database: CDSbank:

  • Description: sequence for each protein annotated in Genbank. CDSbank also stores Genbank feature annotation, a flag to