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ScienceWikis is a catalog of biological knowledge wikis and wiki extensions, aiming to exploit the full potential of wiki technology to harness community intelligence in knowledge integration and curation.

Purpose & Aims

  • Build professional academic wikis for biological knowledge integration and curation (such as, wiki-based gene annotation system).
  • Measure users' contributions, give explicit authorship and provide a standard practice to reward community-curated efforts in bio-wikis.
  • Provide a central archive of quantitative contributions and citations in different bio-wikis.
  • Develop wiki extensions to facilitate biological content creation and editing, data visualization, exchange and sharing.

Biological Wikis

A wiki-based database for community curation of human long non-coding RNAs

A community-curated knowledgebase for the rice research community

A portal for a unified view of the human transcriptome

A wiki-based English-to-Chinese Scientific Nomenclature Dictionary

Wiki extensions

Wiki extensions to facilitate biological content creation and editing, data visualization, exchange and sharing through a variety of e-utility methods.

AuthorReward

LiMi

  • Description: literature mining in aid of gene annotation in biological knowledge wikis.

ColSeq

  • Description: color molecular sequence according to sequence features.

Publications

  • LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs. Nucleic Acids Research(2015), 43:D187-92. PMID=25399417
  • RiceWiki: a wiki-based database for community curation of rice genes. Nucleic Acids Research (2014), 42(Database issue):D1222-1228. PMID=24136999
  • WikiCell: a unified resource platform for human transcriptomics research. Omics: a journal of integrative biology (2012),16.6:357-362. PMID=22702248
  • Community intelligence in knowledge curation: an application to managing scientific nomenclature. PloS one (2013), 8.2:e56961.PMID=23451119
  • AuthorReward: increasing community curation in biological knowledge wikis through automated authorship quantification. Bioinformatics (2013), 29(14):1837-1839.PMID=23732274]
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