Jian Sang

PhD Candidate

Re-annotation Resources

Email: sangj (AT) big.ac.cn
Tel: +86 (10) 8409-7845

PROFESSIONAL EXPERIENCE

EDUCATION

RESEARCH INTERESTS

PROJECTS & RESOURCES

            1. The ICG Project (http://icg.big.ac.cn/)

            2. The IC4R Project (http://ic4r.org)

            3. The RiceWiki Project (http://wiki.ic4r.org)

            4. The Genome Warehouse Project (http://bigd.big.ac.cn/gwh/)

            1. Exploration of the response mechanism underlying Heavy-Metal stress in Sedum alfredii.

            2. Rice genome reannotation based on large-scale integration of RNA-Seq datasets.

PUBLICATIONS

  1. Sang J#, Wang Z#, Li M, Cao J, Niu G, Xia L, Zou D, Wang F, Xu X, Han X, Fan J, Yang Y, Zuo W, Zhang Y, Zhao W, Bao Y, Xiao J, Hu S, Hao L, Zhang Z*: ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization. Nucleic Acids Res  2018. Jan 4;46(D1):D121-D126 [PMID=29036693

  2. Sang J# as co-first author in BIG Data Center Members: Database Resources of the BIG Data Center in 2018. Nucleic Acids Res 2018. Jan 4;46(D1):D14-D20. [PMID=29036542]

  3. Sang J# as co-first author in BIG Data Center Members: The BIG Data Center: from deposition to integration to translation. Nucleic Acids Res2017, 45(D1):D18-D24. [PMID=27899658]

  4. Sang J#, Han X#, Liu M, Qiao, G, Jiang J, Zhuo R*: Selection and Validation of Reference Genes for Real-Time Quantitative PCR in Hyperaccumulating Ecotype of Sedum alfredii under Different Heavy Metals Stresses. PLoS One 2013,8 (12):e82927.[PMID=24340067]

  5. Dai L#, Xu C#, Tian M#Sang J#, Zou D, Li A, Liu G, Chen F, Wu J, Xiao J, Wang X, Yu J, Zhang Z*: Community intelligence in knowledge curation: an application to managing scientific nomenclature. PLoS One 2013, 8(2):e56961. [PMID=23451119]

  6. Xia L, Zou D, Sang J, Xu XJ, Yin HY, Li MW, Wu SY, Hu SN, Hao LL, Zhang Z*: Rice Expression Database (RED): an integrated RNA-Seq-derived gene expression database for rice. Journal of Genetics and Genomics, 2017, 44(5):235-241. [PMID=28529082]

  7. Liu M, Qiu W, He X, Zheng L, Song X, Han X, Jiang J, Qiao G, Sang J, Liu M, Zhuo R*. Functional Characterization of a Gene in Sedum alfredii Hance Resembling Rubber Elongation Factor Endowed with Functions Associated with Cadmium Tolerance. Front Plant Sci 2016, doi: 10.3389/fpls.2016.00965. [PMID=27446189]

  8. Sang J as co-author in the IC4R Project Consortium: Information Commons for Rice (IC4R). Nucleic Acids Res 2016, 44(D1):D1172-1180. [PMID=26519466]

  9. Zhang Y, Han X, Sang J, He X, Liu M, Qiao G, Zhuo R*, He G, Hu J. Transcriptome analysis of immature xylem in the Chinese fir at different developmental phases. Peer J 2016, doi: 10.7717/peerj.2097. [PMID=27330860]

  10. Han X, Yin H, Song X, Zhang Y, Liu M, Sang J, Jiang J, Li J, Zhuo R*. Integration of small RNAs, degradome and transcriptome sequencing in hyperaccumulator Sedum alfredii uncovers a complex regulatory network and provides insights into cadmium phytoremediation. Plant Biotechnol J 2016, doi: 10.1111/pbi.12512. [PMID=26801211]

  11. Zhang Z*, Sang J, Ma L, Wu G, Wu H, Huang D, Zou D, Liu S, Li A, Hao L, Tian M, Xu C, Wang X, Wu J, Xiao J, Dai L, Chen LL, Hu S, Yu J: RiceWiki: a wiki-based database for community curation of rice genes. Nucleic Acids Res 2014, 42:D1222-1228. [PMID=24136999]

  12. Liu M, Qiao G, Jiang J, Han X, Sang J, Zhuo R*. Identification and expression analysis of salt-responsive genes using a comparative microarray approach in Salix matsudana. Molecular biology reports 2014, 41(10),6555-6568.[PMID=24993115]