Phalaenopsis equestris - Plant Editosome Database - BIG Data Center

Summary

Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
accD359562
59790
59808
CDS
CDS
CDS
+
+
+
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
CCU=>CUU
S=>L
S=>L
P=>L
atpA211744
11369
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
atpB153985CDS-mRNAC-to-UUCA=>UUAS=>L
atpF113053CDS-mRNAC-to-UCCA=>CUAP=>L
atpI215272
15473
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
S=>L
P=>L
clpP271590
71113
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
matK32528
1995
2343
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCU=>UUU
CAC=>UAC
CAU=>UAU
S=>F
H=>Y
H=>Y
ndhB1NACDSNAmRNAC-to-UNA=>NANA=>NA
ndhC151073-51418NA-mRNANANA=>NANA=>NA
ndhD1115453CDS-mRNAC-to-UACG=>AUGT=>M
ndhJ150101-50536NA-mRNANANA=>NANA=>NA
ndhK150647-51187NA-mRNANANA=>NANA=>NA
petB178010CDS+mRNAC-to-UCCA=>CUAP=>L
petL166925CDS+mRNAC-to-UCCU=>CUUP=>L
psaI160787CDS+mRNAC-to-UUCU=>UUUS=>F
psbF165424CDS-mRNAC-to-UUCU=>UUUS=>F
psbH1NA5'UTRNAmRNAC-to-UNA=>NANA=>NA
rpl22146693
88234
CDS
CDS
+
-
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
rpl231146181CDS+mRNAC-to-UUCU=>UUUS=>F
rpoA380548
80380
79918
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
UCA=>UUA
S=>F
S=>L
S=>L
rpoB725152
26955
27012
27027
27105
27240
27549
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
UCG=>UUG
UCA=>UUA
UCG=>UUG
UCU=>UUU
UCC=>UUC
S=>L
P=>L
S=>L
S=>L
S=>L
S=>F
S=>F
rpoC1423551
23410
23101
22972
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCU=>UUU
UCA=>UUA
UCG=>UUG
S=>L
S=>F
S=>L
S=>L
rpoC2118516CDS-mRNAC-to-UUCU=>UUUS=>F
rps14138605CDS-mRNAC-to-UUCA=>UUAS=>L
rps1615036CDS-mRNAC-to-UUCA=>UUAS=>L
rps2116856CDS-mRNAC-to-UACA=>AUAT=>I
rps8182206CDS-mRNAC-to-UUUA=>UUAL=>L
ycf11117631-123122NA-mRNANANA=>NANA=>NA
ycf3344415
44274
44268
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCU=>UUU
ACG=>AUG
CCA=>CUA
S=>F
T=>M
P=>L

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)