Silene noctiflora - Plant Editosome Database - BIG Data Center

Summary

Species: Silene noctiflora
NCBI Taxonomy: 39899
Organelle:Chloroplast (NC_016728.1)
Edited Genes:13
Editing Events:25
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atpA110176CDS-mRNAC-to-UUCC=>UCUS=>S
matK12814CDS-mRNAC-to-UCAU=>UAUH=>Y
ndhA3119683
119458
118951
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
UCC=>UUC
S=>L
S=>L
S=>F
ndhB8142195
141550
141544
141460
141451
141300
141181
140863
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
CCA=>CUA
CAU=>UAU
CCA=>CUA
UCA=>UUA
P=>L
S=>L
S=>L
S=>F
P=>L
H=>Y
P=>L
S=>L
ndhD3116149
115768
115264
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
ACG=>AUG
UCA=>UUA
CCU=>CUU
T=>M
S=>L
P=>L
ndhG1117866CDS-mRNAC-to-UACA=>AUAT=>I
petL154614CDS+mRNAC-to-UCCU=>CUUP=>L
psbL162725CDS+mRNAC-to-UACG=>AUGT=>M
psbZ150488CDS-mRNAC-to-UUCA=>UUAS=>L
rpoA174206CDS-mRNAC-to-UUCU=>UUUS=>F
rpoB224447
24432
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
UCG=>UUG
S=>L
S=>L
rps2114995CDS-mRNAC-to-UUCA=>UUAS=>L
trnI-CAU180118-80191Exon-tRNAC-to-UCAU=>UAUH=>Y

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)