| Species: | Pteridium aquilinum subsp. aquilinum |
| NCBI Taxonomy: | 104588 |
| Organelle: | Chloroplast (NC_014348.1) |
| Edited Genes: | 46 |
| Editing Events: | 120 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 3 | 57136 56207 56983 | CDS CDS CDS | + + + | mRNA mRNA mRNA | C-to-U C-to-U U-to-C | CGA=>UGA ACG=>AUG UAA=>CAA | R=>TERM T=>M TERM=>Q |
| atpA | 3 | 10729 11653 10232-11755 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 52151-53632 53631 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 3 | 12961-13105 11843-12252 13104 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13433-13705 13704 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 15163 15095 14418-15164 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ccsA | 1 | 112125 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| chlB | 3 | 4859-6403 6154 6022 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlL | 3 | 128131-129012 129011 128289 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| infA | 3 | 77713 77767 77591-77833 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 4 | 1441-2934 2676 2670 2933 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhC | 2 | 47936-48298 47938 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhF | 3 | 107700-109901 109547 109271 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| petA | 2 | 60689 60698 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>CAG UAA=>CAA | TERM=>Q TERM=>Q |
| petB | 1 | 72756 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| petN | 2 | 29623-29712 29711 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaA | 2 | 41048 38797-41049 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 38770 36567-38771 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbB | 1 | 70212 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbC | 1 | 31736-33157 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 3 | 33105-34166 34165 33156 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| psbE | 2 | 62885-63136 63085 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbL | 2 | 62618-62734 62733 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28153 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl16 | 3 | 80569 80562-80570 79399-79803 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 83324-83720 82141-82577 83711 82518 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl20 | 2 | 66539 66184-66540 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl21 | 1 | 110503 | CDS | + | mRNA | U-to-C | UGA=>CGA | TERM=>R |
| rpl22 | 2 | 81388-81807 81561 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl23 | 2 | 84053 83779-84054 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 77461 77349-77462 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 76603 75800-76843 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 9 | 23384-26599 26371 24169 24868 24916 25882 24019 25612 26473 | CDS NA NA NA NA NA NA NA NA | - + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 3 | 23219 20574-22219 22901-23333 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | U-to-C NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 20235 16198-20466 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 76883-77275 77155 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 120962 120694-120963 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps18 | 1 | 65717 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps2 | 4 | 15638 15674 15551 15351-16067 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 80679-81335 81290 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 44084-44671 44503 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 139124 97574 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>CAA | NA=>NA TERM=>Q |
| rps8 | 2 | 77962-78360 78359 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 121260-126323 125360 126322 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 10 | 134933 132755 130172 136304 131858 103943 100394 101765 106526 104840 | NA NA NA NA NA CDS CDS CDS CDS CDS | + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UAA=>CAA UGA=>CGA UAA=>CAA UAA=>CAA UAA=>CAA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>Q TERM=>R TERM=>Q TERM=>Q TERM=>Q |
| ycf3 | 4 | 43141-43265 41350-41559 42172-42400 42360 | CDS CDS CDS NA | - - - + | mRNA mRNA mRNA Unanotated Transcript | NA NA NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )