trnI-CAU - Plant Editosome Database - BIG Data Center

Summary

Gene: trnI-CAU
Function: Transfer RNA
Species: 44
Editing Types:
C-to-U (20)
Editing Events: 84 (NA: 64   C-to-U: 20)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Abies sibiricaChloroplast2
NA: 2
120994-121067
66610-66683
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Averrhoa carambolaChloroplast2
NA: 2
153866-153939
89244-89317
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Broussonetia papyriferaPlastid1
NA: 1
158134-158207Exon+NANA=>NANA=>NA
Burmannia championiiChloroplast2
NA: 2
31819-31892
80897-80970
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Burmannia coelestisChloroplast2
NA: 2
153447-153520
85827-85900
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Burmannia cryptopetalaChloroplast2
NA: 2
107060-107133
55107-55180
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Burmannia distichaChloroplast2
NA: 2
153634-153707
82674-82747
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Burmannia nepalensisChloroplast2
NA: 2
42085-42158
93895-93968
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Burmannia oblongaChloroplast2
NA: 2
17952-18025
33159-33232
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Caragana korshinskiiChloroplast1
C-to-U: 1
88493-88566Exon-C-to-UNA=>NANA=>NA
Caragana kozlowiiChloroplast1
C-to-U: 1
89335-89408Exon-C-to-UNA=>NANA=>NA
Caragana microphyllaChloroplast1
C-to-U: 1
88641-88714Exon-C-to-UNA=>NANA=>NA
Carex neurocarpaChloroplast2
NA: 2
106692-106765
178344-178417
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Carissa macrocarpaChloroplast2
NA: 2
153148-153221
87659-87732
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Colobanthus quitensisChloroplast2
C-to-U: 2
149762-149835
84904-84977
Exon
Exon
+
-
C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Cucumis sativusMitochondrion1
C-to-U: 1
383634-383714Exon+C-to-UCAU=>UAUH=>Y
Diospyros blancoiChloroplast2
NA: 2
155648-155721
89271-89344
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Garcinia mangostanaChloroplast2
NA: 2
155839-155912
88726-88799
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gastrochilus fuscopunctatusChloroplast2
NA: 2
143392-143465
85844-85917
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gastrochilus japonicusChloroplast2
NA: 2
144915-144988
87405-87478
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Geranium maderenseMitochondrion2
C-to-U: 2
519471-519544Exon
Exon
+C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Habenaria radiataChloroplast2
NA: 2
152520-152593
87594-87667
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypolytrum nemorumChloroplast2
NA: 2
178021-178094
98199-98272
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Morus cathayanaPlastid2
NA: 2
157212-157285
90124-90197
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Neofinetia falcataChloroplast2
NA: 2
143717-143790
86516-86589
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Neofinetia richardsianaChloroplast2
NA: 2
143718-143791
86517-86590
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Oberonia japonicaChloroplast2
NA: 2
139987-140060
84606-84679
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pelatantheria scolopendrifoliaChloroplast2
NA: 2
144082-144155
88781-88854
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Picea abiesChloroplast1
C-to-U: 1
67753-67826Exon-C-to-UCAU=>UAUH=>Y
Pinus sylvestrisChloroplast2
NA: 2
119530-119603
65887-65960
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pouteria campechianaChloroplast2
NA: 2
155821-155894
89151-89224
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Premna microphyllaChloroplast2
NA: 2
153173-153246
88126-88199
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Psidium guajavaChloroplast2
NA: 2
156717-156790
89727-89800
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rheum wittrockiiPlastid1
NA: 1
156859-156932Exon+NANA=>NANA=>NA
Sanionia uncinataChloroplast2
NA: 2
86423-86496Exon
Exon
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Silene conicaChloroplast2
C-to-U: 2
146350-146423
80915-80988
Exon
Exon
+
-
C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Silene latifoliaChloroplast1
C-to-U: 1
84201-84274Exon-C-to-UCAU=>UAUH=>Y
Silene noctifloraChloroplast1
C-to-U: 1
80118-80191Exon-C-to-UCAU=>UAUH=>Y
Silene vulgarisChloroplast2
C-to-U: 2
83755-83828Exon
Exon
-C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Tacca leontopetaloidesChloroplast2
NA: 2
160172-160245
86327-86400
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Thrixspermum japonicumChloroplast2
NA: 2
146480-146553
87970-88043
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Trillium cuneatumPlastid2
NA: 2
153917-153990
88562-88635
Exon
Exon
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Trillium decumbensPlastid2
NA: 2
155382-155455
88509-88582
Exon
Exon
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Welwitschia mirabilisMitochondrion1
C-to-U: 1
369902-369975Exon-C-to-UCAU=>UAUH=>Y
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)