rps8 - Plant Editosome Database - BIG Data Center

Summary

Gene: rps8
Function: Ribosomal protein
Species: 48
Editing Factors:2 (ORRM1, OsSLC1)
Editing Types:
C-to-U (42)
U-to-C (3)
Editing Events: 88 (NA: 43   C-to-U: 42   U-to-C: 3)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
75639-76037CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
79711-80109CDS-NANA=>NANA=>NA
Anthoceros angustusChloroplast7
C-to-U: 4
NA: 1
U-to-C: 2
99068-99466
99139
99148
99153
99202
99271
99375
NA
CDS
NA
NA
NA
NA
NA
+
-
C-to-U
NA
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast2
C-to-U: 1
NA: 1
76308-76706
76705
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
C-to-U: 1
NA: 1
76152-76550
76549
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast2
C-to-U: 1
NA: 1
76295-76693
76692
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
C-to-U: 1
NA: 1
76260-76658
76657
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast3
C-to-U: 2
NA: 1
76383-76781
76385
76780
NA
NA
CDS
+
-
C-to-U
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Bowenia serrulataChloroplast1
NA: 1
81809-82207CDS+NANA=>NANA=>NA
Ceratozamia hildaeChloroplast1
NA: 1
81863-82261CDS+NANA=>NANA=>NA
Christella appendiculataChloroplast2
C-to-U: 1
NA: 1
76542-76940
76939
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cicer arietinumChloroplast1
NA: 1
78112-78510CDS-NANA=>NANA=>NA
Cocos nuciferaChloroplast2
C-to-U: 2
80156CDS
CDS
-C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
Cypripedium macranthosChloroplast2
C-to-U: 2
81574
81654
CDS
CDS
-C-to-U
C-to-U
CAU=>UAU
UCA=>UUA
H=>Y
S=>L
Deparia lanceaChloroplast2
C-to-U: 1
NA: 1
76056-76454
76453
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast2
C-to-U: 1
NA: 1
76367-76765
76764
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
C-to-U: 1
NA: 1
76343-76741
76740
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deschampsia antarcticaPlastid1
C-to-U: 1
76373CDS-C-to-UUCA=>UUAS=>L
Dioon spinulosumChloroplast1
NA: 1
82755-83153CDS-NANA=>NANA=>NA
Diplaziopsis cavalerianaChloroplast2
C-to-U: 1
NA: 1
76751-77149
77148
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast2
C-to-U: 1
NA: 1
77028-77426
77425
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
C-to-U: 1
NA: 1
76313-76711
76710
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast2
C-to-U: 1
NA: 1
76240-76638
76637
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
C-to-U: 1
NA: 1
76211-76609
76608
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dryopteris decipiensChloroplast2
C-to-U: 1
NA: 1
76274-76672
76671
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Elaeis guineensisChloroplast1
U-to-C: 1
81489CDSNAU-to-CAAU=>AACN=>N
Encephalartos lehmanniiChloroplast1
NA: 1
84558-84956CDS-NANA=>NANA=>NA
Homalosorus pycnocarposChloroplast2
C-to-U: 1
NA: 1
77032-77430
77429
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast2
C-to-U: 1
NA: 1
75945-76343
76342
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Isoetes flaccidaChloroplast1
NA: 1
5863-6264CDS+NANA=>NANA=>NA
Lepidozamia peroffskyanaChloroplast1
NA: 1
84644-85042CDS-NANA=>NANA=>NA
Lygodium japonicumChloroplast1
NA: 1
78782-79180CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
C-to-U: 1
NA: 1
76338-76736
76735
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Macrozamia mountperriensisChloroplast1
NA: 1
84710-85108CDS-NANA=>NANA=>NA
Marsilea crenataChloroplast1
NA: 1
81312-81710CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast2
C-to-U: 1
NA: 1
75703-76101
76100
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast2
C-to-U: 1
NA: 1
76519-76917
76916
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
100940-101338NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 1
NA: 1
75355-75753
75752
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Panicum virgatumChloroplast1
C-to-U: 1
78098CDSNAC-to-UNA=>NAS=>L
Phalaenopsis equestrisChloroplast1
C-to-U: 1
82206CDS-C-to-UUUA=>UUAL=>L
Pseudophegopteris auritaChloroplast2
C-to-U: 1
NA: 1
75981-76379
76378
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
C-to-U: 1
NA: 1
77962-78360
78359
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
C-to-U: 1
NA: 1
77094-77492
77491
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Saccharum hybrid cultivar SP80-3280Chloroplast1
C-to-U: 1
NACDSNAC-to-UUCA=>UUAS=>L
Sciadopitys verticillataChloroplast1
C-to-U: 1
40163CDS+C-to-UACG=>AUGT=>M
Woodsia macrochlaenaChloroplast2
C-to-U: 1
NA: 1
76261-76659
76658
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast2
C-to-U: 1
NA: 1
76219-76617
76616
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)