nad4L - Plant Editosome Database - BIG Data Center

Summary

Gene: nad4L
Function: NADH dehydrogenase
Species: 54
Editing Factors:15 (DYW2, EMP21, EMP9, GRS1, MEF37, MEF7, MORF3, MORF8, NUWA, ORRM4, OTP90, PGN, SLO2, SlORRM4, SMK6)
Editing Types:
C-to-U (394)
U-to-C (13)
Editing Events: 493 (C-to-U: 394   NA: 86   U-to-C: 13)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Ajuga reptansMitochondrion2
NA: 2
219459-219761CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Allium cepaMitochondrion1
NA: 1
246284-246586CDS+NANA=>NANA=>NA
Arabidopsis thalianaMitochondrion20
C-to-U: 18
NA: 2
188929-189231
189035
189044
189074
189122
189132
189137
189146
189177
189191
CDS
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
-
+
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asclepias syriacaMitochondrion2
NA: 2
633449-633751CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Beta macrocarpaMitochondrion10
C-to-U: 10
337168
337213
337221
337261
337276
337297
337324
337345
337363
337447
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
UCA=>UUA
CGG=>UGG
UCG=>UUG
UCA=>UUA
UCU=>UUU
UCA=>UUA
CCA=>CUA
UCA=>UUA
UCG=>UUG
T=>M
S=>L
R=>W
S=>L
S=>L
S=>F
S=>L
P=>L
S=>L
S=>L
Beta vulgaris subsp. maritimaMitochondrion10
C-to-U: 10
337209
337254
337262
337302
337317
337338
337365
337386
337404
337488
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
UCA=>UUA
ACG=>AUG
UCA=>UUA
UCA=>UUA
UCG=>UUG
CGG=>UGG
UCG=>UUG
UCU=>UUU
S=>L
P=>L
S=>L
T=>M
S=>L
S=>L
S=>L
R=>W
S=>L
S=>F
Beta vulgaris subsp. vulgarisMitochondrion10
C-to-U: 10
55325
55409
55427
55448
55475
55496
55511
55551
55559
55604
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
CCA=>CUA
UCG=>UUG
CGG=>UGG
ACG=>AUG
UCA=>UUA
UCA=>UUA
UCG=>UUG
UCA=>UUA
S=>F
S=>L
P=>L
S=>L
R=>W
T=>M
S=>L
S=>L
S=>L
S=>L
Brassica napusMitochondrion18
C-to-U: 18
42267
42294
42315
42325
42330
42339
42370
42384
42417
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
UCA=>UUA
UCA=>UUA
UCG=>UUG
UCU=>UUU
CCA=>UCA
CCU=>CUU
UCA=>UUA
UCG=>UUG
UCU=>UUU
CGG=>UGG
CCU=>CUU
CCU=>CUU
UCG=>UUG
UCA=>UUA
UCG=>UUG
CGG=>UGG
CCA=>UCA
P=>L
S=>L
S=>L
S=>L
S=>F
P=>S
P=>L
S=>L
S=>L
S=>F
R=>W
P=>L
P=>L
S=>L
S=>L
S=>L
R=>W
P=>S
Butomus umbellatusMitochondrion1
NA: 1
412469-412771CDS+NANA=>NANA=>NA
Carica papayaMitochondrion1
NA: 1
290747-291049CDS-NANA=>NANA=>NA
Citrullus lanatusMitochondrion13
C-to-U: 13
366236
366245
366254
366275
366302
366323
366333
366338
366347
366378
366392
366397
366431
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
AUC=>AUU
CCA=>UCA
ACG=>AUG
UCA=>UYA
UCA=>UYA
CCA=>CUA
UCU=>UUU
UCG=>UYG
UCA=>UUA
UCG=>UUG
UCA=>UYA
CCU=>CUU
CGG=>UGG
I=>I
P=>S
T=>M
S=>S/L
S=>S/L
P=>L
S=>F
S=>S/L
S=>L
S=>L
S=>S/L
P=>L
R=>W
Cucumis sativusMitochondrion1
NA: 1
1471307-1471609CDS+NANA=>NANA=>NA
Cucurbita pepoMitochondrion13
C-to-U: 13
470644
470678
470683
470697
470728
470737
470742
470752
470773
470800
470821
470830
470839
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UYA
ACG=>AUG
CCA=>CUA
UCG=>UUG
UCA=>UUA
UCU=>UUU
AUC=>AUU
CCU=>CUU
UCA=>UYA
CGG=>UGG
CCA=>UCA
UCG=>UUG
S=>L
S=>S/L
T=>M
P=>L
S=>L
S=>L
S=>F
I=>I
P=>L
S=>S/L
R=>W
P=>S
S=>L
Cycas taitungensisMitochondrion2
C-to-U: 2
30112CDS
CDS
-C-to-U
C-to-U
CAA=>UAA
CAA=>UAA
Q=>TERM
Q=>TERM
Ginkgo bilobaMitochondrion1
NA: 1
303091-303393CDS-NANA=>NANA=>NA
Gossypium arboreumMitochondrion2
NA: 2
314821-315123CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium barbadenseMitochondrion2
NA: 2
338079-338381CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium davidsoniiMitochondrion2
NA: 2
369119-369421CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium harknessiiMitochondrion2
NA: 2
415705-416007CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium hirsutumMitochondrion2
NA: 2
412965-413267CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium raimondiiMitochondrion2
NA: 2
350157-350459CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium thurberiMitochondrion2
NA: 2
369177-369479CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hesperelaea palmeriMitochondrion2
NA: 2
605166-605468CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hibiscus cannabinusMitochondrion1
C-to-U: 1
495757-496059CDS+C-to-UNA=>AUGNA=>M
Ipomoea nilMitochondrion2
C-to-U: 2
36367-36666CDS
CDS
-C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Liriodendron tulipiferaMitochondrion2
NA: 2
65104-65406CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lotus japonicusMitochondrion26
C-to-U: 26
98431
98440
98449
98470
98497
98518
98528
98533
98542
98573
98587
98620
98626
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
UCA=>UUA
UCG=>UUG
CGG=>UGG
UCA=>UUA
UCG=>UUG
UCA=>UUA
UCG=>UUG
CGG=>UGG
ACG=>AUG
UCG=>UUG
UCA=>UUA
CCA=>UCA
UCA=>UUA
ACG=>AUG
UCU=>UUU
CCA=>UCA
UCA=>UUA
UCA=>UUA
CCU=>CUU
UCU=>UUU
CCU=>CUU
UCA=>UUA
UCA=>UUA
CCU=>CUU
S=>L
P=>L
S=>L
S=>L
R=>W
S=>L
S=>L
S=>L
S=>L
R=>W
T=>M
S=>L
S=>L
P=>S
S=>L
T=>M
S=>F
P=>S
S=>L
S=>L
P=>L
S=>F
P=>L
S=>L
S=>L
P=>L
Medicago truncatulaMitochondrion2
NA: 2
136381-136683CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Millettia pinnataMitochondrion26
C-to-U: 26
80964
80970
81003
81017
81048
81057
81062
81072
81093
81120
81141
81150
81159
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCA=>UUA
UCG=>UUG
UCG=>UUG
UCU=>UUU
UCA=>UUA
UCA=>UUA
UCA=>UUA
CCU=>CUU
UCU=>UUU
ACG=>AUG
UCA=>UUA
CCU=>CUU
UCA=>UUA
CCA=>UCA
ACG=>AUG
CCA=>UCA
CCU=>CUU
UCU=>UUU
UCU=>UUU
UCA=>UUA
UCA=>UUA
CCU=>CUU
UCA=>UUA
CGG=>UGG
UCA=>UUA
R=>W
S=>L
S=>L
S=>L
S=>F
S=>L
S=>L
S=>L
P=>L
S=>F
T=>M
S=>L
P=>L
S=>L
P=>S
T=>M
P=>S
P=>L
S=>F
S=>F
S=>L
S=>L
P=>L
S=>L
R=>W
S=>L
Nelumbo nuciferaMitochondrion13
C-to-U: 13
74931
74970
74984
75015
75024
75029
75039
75060
75087
75108
75117
75126
75210
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
CCA=>CUA
UCU=>UUU
UCG=>UUG
UCU=>UUU
CCU=>CUU
ACG=>AUG
CGG=>UGG
CCA=>UCA
UCA=>UUA
UCA=>UUA
UCG=>UUG
S=>L
S=>L
P=>L
S=>F
S=>L
S=>F
P=>L
U=>M
R=>W
P=>S
S=>L
S=>L
S=>L
Nothoceros aenigmaticusMitochondrion4
C-to-U: 2
U-to-C: 2
11495
11543
CDS
CDS
CDS
CDS
+U-to-C
C-to-U
C-to-U
U-to-C
UGA=>CGA
CAA=>UAA
CAA=>UAA
UGA=>CGA
TERM=>R
Q=>TERM
Q=>TERM
TERM=>R
Ophioglossum californicumMitochondrion50
C-to-U: 46
U-to-C: 4
365705
365812
366129
366130
366142
366155
366171
366185
366198
366225
366230
366240
366249
366261
366265
366270
366287
366305
366309
366318
366327
366360
366383
366411
366414
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
NA=>NA
CCA=>UCA
UCA=>UUA
NA=>NA
UCA=>UUA
ACU=>AUU
CGG=>UGG
UCG=>UUG
NA=>NA
UCU=>UUU
UCG=>UUG
CUG=>UUG
CCG=>CUG
GUC=>GUU
CCG=>CUG
UCA=>UUA
CUU=>UUU
UCG=>UUG
NA=>NA
UCA=>UUA
UAA=>CAA
NA=>NA
CCA=>UCA
UCA=>UUA
UCU=>UUU
CCC=>CUC
AAC=>AAU
UGG=>CGG
CGG=>UGG
UCG=>UUG
UCA=>UUA
NA=>NA
UCA=>UUA
UCA=>UUA
GUC=>GUU
CCG=>CUG
NA=>NA
UCG=>UUG
CUG=>UUG
NA=>NA
ACU=>AUU
UCA=>UUA
UAA=>CAA
UGG=>CGG
CUU=>UUU
UCG=>UUG
CCG=>CUG
CCC=>CUC
AAC=>AAU
S=>L
NA=>NA
P=>S
S=>L
NA=>NA
S=>L
T=>I
R=>W
S=>L
NA=>NA
S=>F
S=>L
L=>L
P=>L
V=>V
P=>L
S=>L
L=>F
S=>L
NA=>NA
S=>L
TERM=>Q
NA=>NA
P=>S
S=>L
S=>F
P=>L
N=>N
W=>R
R=>W
S=>L
S=>L
NA=>NA
S=>L
S=>L
V=>V
P=>L
NA=>NA
S=>L
L=>L
NA=>NA
T=>I
S=>L
TERM=>Q
W=>R
L=>F
S=>L
P=>L
P=>L
N=>N
Oryza sativa Indica GroupMitochondrion2
C-to-U: 2
299790CDS
CDS
+C-to-U
C-to-U
ACG=>UCG
ACG=>UCG
T=>S
T=>S
Oryza sativa Japonica GroupMitochondrion10
C-to-U: 10
298830
298836
298869
298883
298923
298928
298938
299007
299016
299025
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
UCA=>UUA
UCA=>UUA
CCA=>CUA
CCA=>UCA
UCA=>UUA
UCU=>UUU
CGG=>UGG
ACG=>AUG
S=>L
P=>L
S=>L
S=>L
P=>L
P=>S
S=>L
S=>F
R=>W
T=>M
Phaeoceros laevisMitochondrion2
NA: 1
U-to-C: 1
132329-132628
132376
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Phoenix dactyliferaMitochondrion1
NA: 1
249264-249566CDS-NANA=>NANA=>NA
Pleurozia purpureaMitochondrion1
C-to-U: 1
68008CDS+C-to-UACG=>AUGT=>M
Psilotum nudumMitochondrion12
C-to-U: 12
86372
86410
86425
86428
86479
86482
86490
86496
86512
86518
86626
86762
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
5'UTR
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACC=>ACU
UCU=>UUU
UCA=>UUA
ACG=>AUG
UCC=>UCU
ACG=>AUG
NA=>NA
CCC=>UCC
UCG=>UUG
CCU=>CUU
CCA=>CUA
NA=>NA
T=>T
S=>F
S=>L
T=>M
S=>S
T=>M
NA=>NA
P=>S
S=>L
P=>L
P=>L
NA=>NA
Salvia miltiorrhizaMitochondrion1
NA: 1
291809-292111CDS+NANA=>NANA=>NA
Sorghum bicolorMitochondrion2
C-to-U: 2
310261CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Spirodela polyrhiza 7498Mitochondrion2
NA: 2
119250-119552CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Stratiotes aloidesMitochondrion1
C-to-U: 1
82351CDS-C-to-UACG=>AUGT=>M
Tripsacum dactyloidesMitochondrion2
C-to-U: 1
NA: 1
325724-326026
325725
NA
CDS
+
-
C-to-U
NA
NA=>AUG
NA=>NA
NA=>M
NA=>NA
Vigna angularisMitochondrion2
NA: 2
214191-214493NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Vigna radiata var. radiataMitochondrion1
C-to-U: 1
395640CDS+C-to-UACG=>AUGT=>M
Vitis viniferaMitochondrion2
NA: 2
274032-274334CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Zea luxuriansMitochondrion2
C-to-U: 2
119553CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Zea mays subsp. maysMitochondrion3
NA: 3
26910-27212CDS
CDS
CDS
+NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Zea mays subsp. parviglumisMitochondrion1
C-to-U: 1
170855CDS+C-to-UACG=>AUGT=>M
Zea perennisMitochondrion2
C-to-U: 2
141864CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Ziziphus jujubaMitochondrion2
NA: 2
259155-259457CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Zostera marinaMitochondrion1
C-to-U: 1
29612CDS-C-to-UACG=>AUGT=>M
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)