cox3 - Plant Editosome Database - BIG Data Center

Summary

Gene: cox3
Function: Cytochrome c oxidase
Species: 24
Editing Factors:18 (DEK40, DYW2, EMP21, EMP5, MEF11, MEF13, MEF21, MEF26, MEF37, MEF8, MORF1, MORF3, NUWA, OGR1, ORRM4, OTP90, PGN, PpPPR_77)
Editing Types:
C-to-U (401)
U-to-C (9)
Editing Events: 416 (C-to-U: 401   U-to-C: 9   NA: 6)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Anomodon attenuatusMitochondrion1
C-to-U: 1
70502CDS+C-to-UCAA=>UAAQ=>TERM
Anomodon rugeliiMitochondrion1
C-to-U: 1
70580CDS+C-to-UCAA=>UAAQ=>TERM
Arabidopsis thalianaMitochondrion16
C-to-U: 16
218391
218524
218536
218590
218593
218692
218701
218882
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
CCU=>CUU
UCU=>UUU
UCU=>UUU
UCU=>UUU
UCU=>UUU
UUC=>UUU
UUC=>UUU
UCU=>UUU
UCU=>UUU
CCA=>UCA
CCA=>UCA
CCU=>CUU
CCU=>CUU
CCU=>CUU
CCU=>CUU
P=>L
P=>L
S=>F
S=>F
S=>F
S=>F
F=>F
F=>F
S=>F
S=>F
P=>S
P=>S
P=>L
P=>L
P=>L
P=>L
Asclepias syriacaMitochondrion2
NA: 2
213293-214090CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Beta macrocarpaMitochondrion4
C-to-U: 4
213395
213469
213513
213647
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCU=>UUU
CUA=>UUA
AUC=>AUU
R=>W
S=>F
L=>L
I=>I
Beta vulgaris subsp. maritimaMitochondrion4
C-to-U: 4
213478
213552
213596
213730
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CGG=>UGG
CUA=>UUA
AUC=>AUU
S=>F
R=>W
L=>L
I=>I
Beta vulgaris subsp. vulgarisMitochondrion4
C-to-U: 4
297608
297682
297726
297860
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
AUC=>AUU
CUA=>UUA
CGG=>UGG
S=>F
I=>I
L=>L
R=>W
Brassica napusMitochondrion14
C-to-U: 14
96597
96730
96742
96796
96799
96898
96907
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>UCA
UCU=>UUU
CCU=>CUU
UCU=>UUU
CCU=>CUU
CCU=>CUU
CCA=>UCA
CCU=>CUU
UCU=>UUU
UCU=>UUU
CCU=>CUU
CCU=>CUU
UCU=>UUU
UCU=>UUU
P=>S
S=>F
P=>L
S=>F
P=>L
P=>L
P=>S
P=>L
S=>F
S=>F
P=>L
P=>L
S=>F
S=>F
Citrullus lanatusMitochondrion10
C-to-U: 10
68353
68462
68506
68521
68528
68531
68605
68630
68729
68971
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CUA=>YUA
CUU=>UUU
UCU=>UUU
CGG=>UGG
UCA=>UUA
CCU=>CUU
CGG=>UGG
CCU=>CUU
CGG=>UGG
S=>F
L=>L
L=>F
S=>F
R=>W
S=>L
P=>L
R=>W
P=>L
R=>W
Cucurbita pepoMitochondrion6
C-to-U: 6
950467
950482
950489
950492
950566
950690
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
CUU=>UUU
UCU=>UUU
UCU=>UUU
UCA=>UUA
CGG=>UGG
R=>W
L=>F
S=>F
S=>F
S=>L
R=>W
Ginkgo bilobaMitochondrion33
C-to-U: 33
335219
335225
335321
335322
335335
335339
335418
335424
335427
335450
335459
335461
335462
335465
335472
335475
335483
335487
335516
335541
335574
335583
335585
335625
335658
335688
335726
335735
335763
335766
335799
335810
335814
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CCC=>CUC
CCA=>UCA
UCA=>UUA
UUC=>UUU
ACA=>AUA
CCA=>UCA
CAC=>UAC
UCU=>UUU
CUC=>UUC
CGG=>UGG
CUC=>UUC
UCC=>UUC
CUU=>UUU
CCG=>CUG
CGG=>UGG
CUU=>UUU
UCU=>UUU
CCG=>UCG
CCA=>UCA
CCA=>CUA
CCU=>CUU
UCG=>UUG
CCU=>UCU
CGG=>UGG
UCA=>UUA
UCA=>UUA
CUC=>CUU
UCC=>UUC
CCU=>CUU
UCU=>UUU
CCG=>UCG
UCC=>UUC
P=>L
P=>L
P=>S
S=>L
F=>F
T=>I
P=>S
H=>Y
S=>F
L=>F
R=>W
L=>F
S=>F
L=>F
P=>L
R=>W
L=>F
S=>F
P=>S
P=>S
P=>L
P=>L
S=>L
P=>S
R=>W
S=>L
S=>L
L=>L
S=>F
P=>L
S=>F
P=>S
S=>F
Hypnum imponensMitochondrion1
C-to-U: 1
70101CDS+C-to-UCAA=>UAAQ=>TERM
Lotus japonicusMitochondrion24
C-to-U: 24
299076
299086
299328
299427
299452
299526
299529
299536
299551
299577
299583
299595
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCU=>UUU
CGG=>UGG
CCU=>CUU
UCA=>UUA
CCU=>CUU
CCG=>CUG
CUU=>UUU
CGG=>UGG
CGG=>UGG
UCU=>UUU
CCA=>CUA
UCU=>UUU
CGG=>UGG
UCU=>UUU
CCU=>CUU
CCU=>CUU
UCA=>UUA
CGG=>UGG
CCG=>CUG
CUU=>UUU
UCU=>UUU
CCA=>CUA
CGG=>UGG
S=>F
S=>F
R=>W
P=>L
S=>L
P=>L
P=>L
L=>F
R=>W
R=>W
S=>F
P=>L
S=>F
R=>W
S=>F
P=>L
P=>L
S=>L
R=>W
P=>L
L=>F
S=>F
P=>L
R=>W
Millettia pinnataMitochondrion18
C-to-U: 18
105897
105996
106021
106095
106098
106105
106120
106152
106164
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CUU=>UUU
UCA=>UUA
UCU=>UUU
CGG=>UGG
UCU=>UUU
CCU=>CUU
CUU=>UUU
UCA=>UUA
CCU=>CUU
CGG=>UGG
CGG=>UGG
CCU=>CUU
UCU=>UUU
CCU=>CUU
UCU=>UUU
CGG=>UGG
UCU=>UUU
S=>F
L=>F
S=>L
S=>F
R=>W
S=>F
P=>L
L=>F
S=>L
P=>L
R=>W
R=>W
P=>L
S=>F
P=>L
S=>F
R=>W
S=>F
Nelumbo nuciferaMitochondrion18
C-to-U: 18
435469
435602
435614
435620
435646
435655
435661
435668
435671
435745
435770
435776
435779
435869
435884
435923
435959
436010
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCC=>UUC
CCG=>CUG
UCU=>UUU
UCG=>UUG
CCC=>CUC
CCU=>CUU
UCC=>UUC
CUU=>UUU
CCA=>UCA
CGG=>UGG
CCU=>CUU
UCA=>UUA
UCU=>UUU
CCU=>CUU
UCC=>UUC
UCU=>UUU
CUU=>UUU
R=>W
S=>F
P=>L
S=>F
S=>L
P=>L
P=>L
S=>F
L=>F
P=>S
R=>W
P=>L
S=>L
S=>F
P=>L
S=>F
S=>F
L=>F
Nothoceros aenigmaticusMitochondrion2
U-to-C: 2
169473CDS
CDS
+U-to-C
U-to-C
UAA=>CAA
UAA=>CAA
TERM=>Q
TERM=>Q
Ophioglossum californicumMitochondrion60
C-to-U: 58
U-to-C: 2
168556
168579
168580
168647
168657
168667
168687
168715
168717
168718
168748
168799
168891
168896
168902
168916
168965
168975
169009
169016
169031
169050
169051
169057
169060
169063
169075
169183
169323
169326
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCC=>UCU
UCC=>UUC
CUU=>UUU
ACU=>AUU
NA=>NA
UCC=>UUC
CCU=>CUU
UGC=>UGU
UCC=>UUC
AUC=>AUU
UCA=>UUA
UCU=>UUU
CCA=>CUA
UCG=>UUG
UUC=>UUU
CUA=>UUA
UGC=>UGU
ACC=>AUC
UCC=>UCU
CUU=>UUU
NA=>NA
GUC=>GUU
CCA=>CUA
UUC=>UUU
CGG=>UGG
UCC=>UUC
CCU=>CUU
AUC=>AUU
UCU=>UUU
UAA=>CAA
CGG=>UGG
GUC=>GUU
CCU=>CUU
CUA=>UUA
ACC=>AUC
UCA=>UUA
UUC=>UUU
CCA=>UCA
UAA=>CAA
AUC=>AUU
CCA=>CUA
NA=>NA
CGG=>UGG
CCU=>CUU
UCA=>UUA
ACU=>AUU
UCA=>UUA
UCC=>UUC
UUC=>UUU
CCU=>CUU
CGG=>UGG
CCU=>CUU
UCC=>UUC
CCA=>CUA
UCA=>UUA
UCG=>UUG
CCA=>UCA
AUC=>AUU
NA=>NA
UCA=>UUA
S=>S
S=>F
L=>F
T=>I
NA=>NA
S=>F
P=>L
C=>C
S=>F
I=>I
S=>L
S=>F
P=>L
S=>L
F=>F
L=>L
C=>C
T=>I
S=>S
L=>F
NA=>NA
V=>V
P=>L
F=>F
R=>W
S=>F
P=>L
I=>I
S=>F
TERM=>Q
R=>W
V=>V
P=>L
L=>L
T=>I
S=>L
F=>F
P=>S
TERM=>Q
I=>I
P=>L
NA=>NA
R=>W
P=>L
S=>L
T=>I
S=>L
S=>F
F=>F
P=>L
R=>W
P=>L
S=>F
P=>L
S=>L
S=>L
P=>S
I=>I
NA=>NA
S=>L
Oryza sativa Japonica GroupMitochondrion1
C-to-U: 1
17270CDS-C-to-UCGG=>UGGR=>W
Phaeoceros laevisMitochondrion1
U-to-C: 1
36780CDS+U-to-CUAA=>CAATERM=>Q
Phlegmariurus squarrosusMitochondrion2
NA: 2
236086-236712
237489-237659
CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Psilotum nudumMitochondrion22
C-to-U: 22
62714
62718
62719
62749
62775
62829
62882
63017
63127
63160
63178
63189
63220
63257
63288
63333
63339
63370
63568
63621
63625
63636
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCA=>UUA
NA=>NA
UUC=>UUU
CGG=>UGG
UCA=>UUA
CCA=>CUA
ACC=>ACU
NA=>NA
CCA=>UCA
CGG=>UGG
NA=>NA
CUC=>CUU
UCG=>UUG
UCC=>UUC
CUG=>UUG
NA=>NA
UCA=>UUA
CCU=>UCU
CCA=>UCA
UUC=>UUU
CCA=>CUA
R=>W
S=>L
NA=>NA
F=>F
R=>W
S=>L
P=>L
T=>T
NA=>NA
P=>S
R=>W
NA=>NA
L=>L
S=>L
S=>F
L=>L
NA=>NA
S=>L
P=>S
P=>S
F=>F
P=>L
Rhazya strictaMitochondrion16
C-to-U: 16
316268
316278
316466
316520
316610
316613
316718
316734
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
CCU=>CUU
CUU=>UUU
CUU=>UUU
UCC=>UUC
UCC=>UUC
CCC=>CUC
CCC=>CUC
CCA=>CUA
CCA=>CUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
UCU=>UUU
CGG=>UGG
CGG=>UGG
P=>L
P=>L
L=>F
L=>F
S=>F
S=>F
P=>L
P=>L
P=>L
P=>L
S=>L
S=>L
S=>F
S=>F
R=>W
R=>W
Sanionia uncinataMitochondrion2
C-to-U: 2
69783CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
CAA=>UAA
Q=>TERM
Q=>TERM
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)