MORF1 - Plant Editosome Database

Editing Details

Species

Gene ID

Organelle

Edited Gene

Position

Region

Editing Type

Codon

Amino Acid

Molecular Effect

Experiment Details

Arabidopsis thaliana

AT4G20020

Mitochondrion

atp4

138

CDS

C-to-U

AUC=>AUU

I=>I

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

atp9

167

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

164

CDS

C-to-U

CCG=>CUG

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

193

CDS

C-to-U

CCU/CCU=>UCU/UUU

P=>S/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

194

CDS

C-to-U

CCU/CCU=>CUU/UUU

P=>L/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

367

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

379

CDS

C-to-U

CCA/CCA=>UCA/UUA

P=>S/L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

380

CDS

C-to-U

CCA/CCA=>CUA/UUA

P=>L/L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

424

CDS

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

551

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmB

566

CDS

C-to-U

UCC=>UUC

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmC

184

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmC

421

CDS

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmC

458

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmC

624

CDS

C-to-U

AUC=>AUU

I=>I

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmC

673

CDS

C-to-U

CCU=>UCU

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFC

103

CDS

C-to-U

CCC=>UCC

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFC

123

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFC

175

CDS

C-to-U

CUA=>UUA

L=>L

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFC

333

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFC

406

CDS

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFC

1280

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFN2

CDS

C-to-U

AAC=>AAU

N=>N

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFN2

176

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

ccmFN2

208

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

cox2

138

CDS

C-to-U

CUC=>CUU

L=>L

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

cox3

257

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

matR

1807

CDS

C-to-U

CAC=>UAC

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

144

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Increased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

361

CDS

C-to-U

CUC=>UUC

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

377

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

387

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

406

CDS

C-to-U

CCU/CCU=>UCU/UUU

P=>S/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

407

CDS

C-to-U

CCU/CCU=>CUU/UUU

P=>L/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

409

CDS

C-to-U

CCC=>UCC

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

412

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

440

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

474

CDS

C-to-U

CUC=>CUU

L=>L

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

mttB

666

CDS

C-to-U

UCC/UCC=>UCU/UUU

S=>S/F

Synonymous/Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad1

500

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad2

995

CDS

C-to-U

ACU=>AUU

T=>I

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad4

836

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad5

1895

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad6

446

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad6

463

CDS

C-to-U

CCU=>UCU

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad7

795

CDS

C-to-U

AUC=>AUU

I=>I

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

nad7

1137

CDS

C-to-U

GUC=>GUU

V=>V

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

rpl5

CDS

C-to-U

CAC=>UAC

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

rps3

603

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

rps3

1344

CDS

C-to-U

AGC=>AGU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Increased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

rps3

1470

CDS

C-to-U

UCC=>UCU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

rps3

1534

CDS

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT4G20020

Mitochondrion

rps4

524

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col	morf1-1	EMS Mutant	Single-nucleotide alteration (P165S)	Homozygous	Viable	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	No treatment	No treatment	No treatment	No treatment	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Editing Factor:	MORF1
Synonym:	MULTIPLE ORGANELLAR RNA EDITING FACTOR 1
Description:	Encodes an editing factor involved at numerous editing sites in plant mitochondria.
Protein Family:	MORF/RIP
Subclass:	NA
Construct Structure:	NA
Gene ID & Species:	AT4G20020 (Arabidopsis thaliana)
Edited Gene(s):	atp4 atp9 ccmFN2 ccmB ccmC ccmFC cox2 cox3 matR nad1 nad2 nad4 nad5 nad6 nad7 mttB rpl5 rps3 rps4
Editing Type(s):	C-to-U (110)
Publication(s):	[1] Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants, PNAS, 2012. [PMID=22411807]

Plant Editosome Database
a curated database of RNA editosome in plants

Summary

Editing Details