Consensus Reference Methylomes (CRMs)

Tissue/Cell line Status Number of Samples Data Source CRMs Probes in Reference Methylomes Gene Methylation Profiles
Thyroid Normal 56 TCGA 1 395,946 33,167
Prostate Normal 26 NCBI 1 436,154 33,098
Peripheral Blood Normal 4577 NCBI 34 16,507,408 1,181,024
abdominal adipose Normal 142 NCBI 3 1,455,021 104,193
adipose Normal 87 NCBI 2 969,859 67,730
airway epithelium Normal 41 NCBI 1 485,262 34,735
b lymphocyte Normal 36 NCBI 1 483,496 34,700
bone Normal 50 NCBI 1 475,870 34,623
bone marrow Normal 78 NCBI 1 485,102 34,733
brain cerebellum Normal 261 NCBI 2 967,554 69,440
brain dorsolateral prefronta cortex Normal 450 NCBI 1 485,230 34,731
brain entorhinal cortex Normal 157 NCBI 3 1,445,283 104,074
brain Normal 266 NCBI 2 963,475 69,382
brain frontal cortex Normal 219 NCBI 2 966,178 69,425
brain frontal lobe Normal 213 NCBI 2 967,718 69,446
brain hippocampus Normal 62 NCBI 1 479,827 34,692
brain middle temporal gyrus Normal 71 NCBI 3 1,438,955 103,934
brain occipital lobe Normal 124 NCBI 3 1,439,903 104,085
brain prefrontal cortex Normal 106 NCBI 3 1,449,265 104,138
brain prefrontal cortex neuron Normal 71 NCBI 1 479,826 34,623
brain striatum Normal 33 NCBI 1 407,156 32,655
brain superior temporal gyrus Normal 183 NCBI 3 1,447,128 104,102
brain temporal lobe Normal 130 NCBI 3 1,449,377 104,150
breast Normal 444 NCBI 1 484,958 34,732
breast milk Normal 64 NCBI 1 484,707 34,732
buccal epithelium Normal 1766 NCBI 3 1,454,382 104,185
cartilage Normal 59 NCBI 1 485,023 34,731
CD14 plus monocyte Normal 1303 NCBI 2 970,565 69,464
CD16 plus neutrophil Normal 36 NCBI 1 484,326 34,723
CD19 plus B cell Normal 221 NCBI 2 969,087 69,462
CD3 plus T cell Normal 94 NCBI 1 485,170 34,732
CD4 plus memory T cell Normal 31 NCBI 1 484,134 34,708
CD4 plus naive T cell Normal 31 NCBI 1 484,453 34,723
CD4 plus T cell Normal 453 NCBI 2 970,455 69,458
CD8 plus T cell Normal 178 NCBI 3 1,450,729 104,120
chorionic villus Normal 190 NCBI 2 968,757 69,436
colon Normal 42 NCBI 1 481,528 34,705
colonic mucosa Normal 56 NCBI 1 484,824 34,730
colon mucosa Normal 129 NCBI 2 970,089 69,466
cord blood Normal 515 NCBI 2 969,693 69,459
cord blood leucocyte Normal 64 NCBI 1 484,546 34,722
dermal fibroblast Normal 142 NCBI 3 1,453,863 104,185
duodenum Normal 28 NCBI 1 484,019 34,725
esophagus Normal 105 NCBI 1 485,209 34,734
fetal fibroblast Normal 96 NCBI 1 484,861 34,729
fimbrial fallopian tube Normal 90 NCBI 1 464,392 34,405
foreskin fibroblastm Normal 42 NCBI 1 483,064 34,717
gastric antrum Normal 39 NCBI 1 477,253 34,679
kidney Normal 175 NCBI 3 1,453,735 104,178
leukocyte Normal 2466 NCBI 2 968,498 69,450
liver Normal 358 NCBI 2 969,749 69,464
lung Normal 168 NCBI 2 969,507 69,457
lymphoblastoid Normal 201 NCBI 3 1,455,339 104,181
lymphocyte enriched PBMC Normal 46 NCBI 1 485,113 34,733
lymphocyte Normal 615 NCBI 2 969,739 69,463
mesenchymal stem cell Normal 34 NCBI 1 481,549 34,664
mesenchymal stromal cell Normal 44 NCBI 1 484,902 34,728
muscle Normal 92 NCBI 2 965,230 69,382
muscle vastus lateralis muscle Normal 64 NCBI 1 485,269 34,733
naive CD4 plus T cell Normal 69 NCBI 1 484,817 34,734
nevus Normal 73 NCBI 1 478,416 34,671
olfactory epithelium Normal 99 NCBI 3 1,453,746 104,191
pancreas Normal 35 NCBI 1 482,629 34,704
pancreatic islet Normal 87 NCBI 2 969,066 69,455
peripheral blood mononuclear cell Normal 893 NCBI 2 969,755 69,466
placenta fetal side Normal 41 NCBI 1 485,294 34,733
placenta Normal 1005 NCBI 2 969,383 69,442
placenta maternal side Normal 82 NCBI 1 481,526 34,674
preinvasive lung squamous cell carcinoma lesions Normal 33 NCBI 1 485,073 35,730
proximal fallopian tube Normal 85 NCBI 1 464,131 34,403
saliva Normal 769 NCBI 2 966,916 69,439
semen Normal 337 NCBI 1 485,309 34,735
skeletal muscle Normal 35 NCBI 1 484,348 34,729
skin Normal 81 NCBI 2 969,590 69,461
subcutaneous adipose tissue Normal 765 NCBI 2 958,113 69,198
T cell Normal 182 NCBI 3 1,454,913 104,176
umbilical vein endothelial cell Normal 57 NCBI 1 484,424 34,719
uterine endometrium Normal 51 NCBI 1 484,251 34,724
vaginal epithelium Normal 31 NCBI 1 484,652 34,731
white adipose tissue Normal 45 NCBI 1 483,612 34,718