Browse - MethBank

Cassava (Manihot esculenta)

Methylome Browser

The outermost circle displays chromosomes, whereas other circles from the outer to the inner represent distributions of CG methylation level, CHG methylation level, CHH methylation level, Watson strand genes, methylation level in Watson strand genes, methylation level in Crick strand genes, Crick strand genes, CpG islands, and methylation level in CpG islands. It should be noted that the innermost indicates largest count for Crick strand genes.

The fraction of methylcytosines identified in each sequence context, where H = A, C, or T.

Distribution of the methylcytosine percentage in each sequences context.

Methylation levels in promoters or gene bodies of sample

Project List

Project ID Project Name Platform Submitter Year Experiment No.
SRP064404 Genome-wide methylome study in cassava Illumina HiSeq 2000 Wang H, Jacobsen S 2015 3
SRP072226 Widespread natural variation of DNA methylation within angiosperms Illumina HiSeq 2000 Schmitz RJ 2016 1