Genome Warehouse

Scientific Name: Cyprinus carpio 'wuyuanensis'
Common Names: Wuyuan red carp; Cyprinus carpio var. wuyuanensis, Cyprinus carpio wuyuanensis
Bioproject: PRJCA001408
Biosample: SAMC069720
Accession No.: GWHAATD00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: COLLEGE OF OCEAN & EARTH SCIENCES, Xiamen University
Contact: Peng Xu, xupeng77@xmu.edu.cn
Sequence author(s): Peng Xu
Released Date: 2019-05-09
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: SOAPdenovo MAY-2017
Sequencing & coverage: Illumina HiSeq 430.5
Download: DNA GFF RNA Protein
Publication(s): Peng Xu, et al. The allotetraploid origin and asymmetrical genome evolution of the common carp Cyprinus carpio. Nature Communications. 2019, 10(1):4625.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAATD00000000	-	Hebao red carp	Draft genome in chromosome level	2019-05-09	DNA GFF RNA Protein

Genome size (bp)	1,460,589,189
GC content	37.31%
Genome sequence No.	258,823
Maximum genome sequence length (bp)	36,594,357
Minimum genome sequence length (bp)	201
Average genome sequence length (bp)	5,643
Genome sequence N50 (bp)	24,281,663
Genome sequence N90 (bp)	23,463

Annotation of Whole Genome Assembly

	Protein	Total
Total	44,268	44,268