- Scientific Name
- Thaumarchaeota
- Common Names
- Nitrososphaeraeota, Nitrososphaerota
- Bioproject
- PRJCA000762
- Biosample
- SAMC021097
- Accession No.
- GWHAABK00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Science, Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences
- Contact
- Yong Wang, wangy@idsse.ac.cn
- Sequence author(s)
- Yong Wang, Jiaomei Huang
- Released Date
- 2019-01-09
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v.3.6.2
- Sequencing & coverage
- MiSeq 41.0
- Download
-
DNA
- Publication(s)
- Yong Wang, et al. Genomics insights into ecotype formation of ammonia‐oxidizing archaea in the deep ocean. Environmental Microbiology. 2019, 21(2):716-729.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAABK00000000 | - | Gamma_AOA_mg5 | Draft genome in scaffold level | 2019-01-09 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,009,376 |
| GC content | 36.06% |
| Scaffold sequence No. | 138 |
| Maximum scaffold sequence length (bp) | 38,341 |
| Minimum scaffold sequence length (bp) | 2,059 |
| Average scaffold sequence length (bp) | 7,314 |
| Scaffold N50 (bp) | 9,219 |
| Scaffold N90 (bp) | 3,683 |