Scientific Name
Saccharina japonica
Common Names
Laminaria japonica
Bioproject
PRJCA000920
Biosample
SAMC044121
Accession No.
GWHAAET00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
-, Beijing Institute of Genomics, Chinese Academy of Sciences / China National Center for Bioinformation
Contact
Tao Liu, liutao@ouc.edu.cn
Sequence author(s)
Tao Liu, Shan Chi, Xumin Wang, Shangang Jia, Guoliang Wang, Jun Yu
Released Date
2018-07-18
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
SOAPdenovo 2.04
Sequencing & coverage
Illumina HiSeq 2000 136.0
Download
DNA
Publication(s)
Liu Tao, et al. Evolution of Complex Thallus Alga: Genome Sequencing of Saccharina japonica. Frontiers in Genetics. 2019, 10:378.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAAET00000000 - hd Draft genome in scaffold level 2018-07-18 DNA

Statistics of Genome Assembly

Genome size (bp) 557,432,876
GC content 48.75%
Scaffold sequence No. 70,753
Maximum scaffold sequence length (bp) 728,531
Minimum scaffold sequence length (bp) 200
Average scaffold sequence length (bp) 7,879
Scaffold N50 (bp) 116,215
Scaffold N90 (bp) 13,405