logo
Advanced

  • Withania somnifera
  • WS01
    • Scientific Name
    Withania somnifera
    Common Names
    ashwagandha; Physalis somnifera
    Bioproject
    PRJCA000898
    Biosample
    SAMC042970
    Accession No.
    GWHAAEQ00000000
    GWH reannotation accession
    -
    GSA raw reads
    -
    GVM variations of the species
    -
    Submitter Organization
    Biochemisty, Quaid-i-Azam University
    Contact
    Bushra Mirza, bushramirza@qau.edu.pk
    Sequence author(s)
    Bushra Mirza
    Released Date
    2018-06-15
    Assembly Level
    Complete genome
    Genome Representation
    Partial Genome ( Chloroplast )
    Assembly method
    Velvet 1.2.10
    Sequencing & coverage
    Illumina HiSeq 3000 93.0
    Download
    DNA GFF RNA Protein
    Publication(s)
    -
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHAAEQ00000000 - WS01 Complete genome 2018-06-15 DNA GFF RNA Protein
    GWHAAEQ00000000.1 - WS1 Complete genome 2018-09-29 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 154,386
    GC content 37.67%
    Organellas sequence No. 1
    Annotation of Whole Genome Assembly
    Protein tRNA rRNA Others Total
    Chloroplast 87 45 8 10 150
    Total 87 45 8 10 150
    Annotation Details
    ChrID Protein tRNA rRNA Others Total
    Chloroplast 87 45 8 10 150
    Total 87 45 8 10 150