Genome Warehouse

News

GWH has deposited currently sequenced complete Coronaviridae genome and protein sequences and Severe acute respiratory syndrome coronavirus 2 genome assemblies.

The first five 2019 novel coronaviridae genome sequences have been released by China National Center for Bioinformation and National Genomics Data Center and the download service are provided to worldwide researchers. The sequences are obtained from and authorized by the Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College.

Genome Warehouse

The Genome Warehouse (GWH) is a public repository housing genome-scale data for a wide range of species and delivering a series of web services for genome data submission, storage, release and sharing.

China Genomic Data Sharing Initiative

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Deposit meta-information into GWH databases

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Transfer GWH data to your computer

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View genome information about the released data

Documentation

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Data Growth

Integrated Species View full list

Newly Released View full list

Update Notes
  •  The 'Reviewer Link' generation function in the submission list has been added online. [2020-11-22]
  •  Five complete genome sequences of 2019-nCoV submitted by Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College have been shared with NCBI (accession numbers MT019529~MT019533) through CNCB/NGDC. [2020-01-26]
  •  GWH has integrated nucleic acids and protein sequences of all public coronaviruses (including SARS-CoV-2) that are collected from NCBI, CNGB, NMDC and CNCB/NGDC. [2020-01-22]
  •  Provide dynamic statistics results. [2019-08-28]
  •  Unpublished data is available for 'BIG search' but not accessible. [2019-04-10]
  •  Genome survey sequences submission table is available online. [2018-06-15]
  •  Metagenome submission is supported. [2019-01-11]
  •  Submitter can update release date directly via submission system. [2017-12-07]
  •  Publish genome data release policies and disclaimers. [2017-11-21]
  •  Genome assembly search function is available. [2017-09-28]
  •  Alter the home page layout. [2017-09-25]
  •  Submission system version beta is available online. [2017-07-01]
  •  Develop genome data standards version 1.0 beta. [2017-06-15]
How to Cite

Please cite the accession number GWHXXXX00000000 like this (We recommend you putting these paragraphs in the Materials and Methods section of the paper):

The whole genome sequence data reported in this paper have been deposited in the Genome Warehouse in National Genomics Data Center [1], Beijing Institute of Genomics (China National Center for Bioinformation), Chinese Academy of Sciences, under accession number GWHXXXX00000000 that is publicly accessible at https://bigd.big.ac.cn/gwh.

References:

[1] Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. Nucleic Acids Res 2021, 49(D1):D18–D28. [PMID=33175170]

  Statistics
  • Integrated Animals: 61 genomes, 62 assemblies
  • Integrated Plants: 77 genomes, 88 assemblies
  • Release of Direct Submissions (Total: 3432): 187 Animals; 211 Plants; 14 Fungi; 239 Bacteria; 73 Archaea; 729 Viruses; 1969 Metagenomes; 10 Others
  • Direct Submissions (Total: 17275): 6970 Animals; 1140 Plants; 18 Fungi; 291 Bacteria; 86 Archaea; 1644 Viruses; 6659 Metagenomes; 467 Others
  GWH-supported Deposition
  Latest Released GWH
Organism Accession
Salvia bowleyana GWHASIU00000000
2021-01-11
Rhodotorula toruloides GWHAZHZ00000000
2021-01-11
Uronema nigricans GWHASIO00000000
2021-01-08
Enterococcus thailandicus GWHABKQ00000000
2021-01-05
Candidatus Marinimicrobia GWHAAFU00000000
2021-01-05
Candidatus Marinimicrobia GWHAAFT00000000
2021-01-05
Candidatus Marinimicrobia GWHAAFS00000000
2021-01-05
Candidatus Marinimicrobia GWHAAFR00000000
2021-01-05
Candidatus Marinimicrobia GWHAAFQ00000000
2021-01-05
Candidatus Marinimicrobia GWHAAFP00000000
2021-01-05
  Problems or Questions?

If you have any question or would like to give us any suggestion/comment or report a bug, please feel free to contact us.

Email: gwh@big.ac.cn

QQ group: 541196594

We highly appreciate your comments and suggestions for further improving its functionalities and providing better services.

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