Basic Information

SNP ID zma9
Organism Zea mays
Genome Assembly AGPv4
Version 1
Variation Class SNP
Position chr1:46538
RefSNP Alleles C/T
Synonyms ID  

Gene Annotation

Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
Zm00001d027230 Zm00001d027230_T001 synonymous_variant Ensembl_Plants 1245 Ctg => Ttg Zm00001d027230_P001 395 L => L
Zm00001d027231 Zm00001d027231_T003 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P003 0 - => -
Zm00001d027231 Zm00001d027231_T002 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P002 0 - => -
Zm00001d027231 Zm00001d027231_T006 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P006 0 - => -
Zm00001d027231 Zm00001d027231_T007 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P007 0 - => -
Zm00001d027231 Zm00001d027231_T005 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P005 0 - => -
Zm00001d027231 Zm00001d027231_T004 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P004 0 - => -
Zm00001d027231 Zm00001d027231_T001 downstream_gene_variant Ensembl_Plants 0 - => - Zm00001d027231_P001 0 - => -

Population Diversity

Population Sample # Allele:Frequency Genotype:Frequency