Basic Information

SNP ID chx54895211
Organism Capra hircus
Genome Assembly CHIR_2.0
Version 1
Variation Class SNP
Position chr18:31469793
RefSNP Alleles G/.
Synonyms ID  

Gene Annotation

Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
- intergenic_variant - - - => - - - - => -

Population Diversity

Population Sample # Allele:Frequency Genotype:Frequency

G2P Annotation

Breed/
Population
Sample SizeTissueTrait Trait Ontology Phenotype TypeGenotype TechnologyModelReported LocationEffect AlleleP ValueORR2%Reported GeneEntrez Gene SymbolQTLPMID
Saanen, Toggenburg, and Alpine402-front feetbreed compositionquantitativethe Illumina Caprine 50K BeadChipthe multi-locus mixed model (MLMM) CHIR_1.0:18_297472013.01995E-05 102171734 CDH8 29290434