Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
oas1 1:87 C/A C: intergenic_variant|MODIFIER -  
oas10 1:254 T/C C: intergenic_variant|MODIFIER -  
oas100 1:4629 T/C T: intergenic_variant|MODIFIER -  
oas1000 1:28930 A/G G: intergenic_variant|MODIFIER -  
oas10000 1:416737 G/A A: intron_variant|MODIFIER 101123521 (2-Sep)  
oas100000 1:3555450 C/T T: intron_variant|MODIFIER 443051 (COL6A3)  
oas1000000 1:43840664 G/A A: upstream_gene_variant|MODIFIER 101101824 (TRNAC-GCA)  
oas10000000 2:152518321 A/G G: intergenic_variant|MODIFIER -  
oas10000001 2:152518383 A/G G: intergenic_variant|MODIFIER -  
oas10000002 2:152518384 C/G C: intergenic_variant|MODIFIER -