Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
jcu345477 NW_012124042.1:5285-5295 GTGTTCTTTTC/G GTGTTCTTTTC:  
jcu345478 NW_012124042.1:8168-8169 AT/A AT:  
jcu345479 NW_012124042.1:8173-8174 TG/T TG:  
jcu345480 NW_012124042.1:12735-12736 TC/T T:  
jcu345481 NW_012124042.1:12746 A/AAAG AAAG:  
jcu345482 NW_012124042.1:12774-12775 GA/G G:  
jcu345483 NW_012124042.1:12789-12790 GA/G G:  
jcu345484 NW_012124042.1:12883-12898 CGGGGGGCCCCCCCGG/C CGGGGGGCCCCCCCGG:  
jcu345485 NW_012124042.1:15245 A/ATAT A:  
jcu345486 NW_012124042.1:16259-16261 CAA/C C: